RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KRT38O76015 456 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 VAPBO95292 243 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 ALPIP09923 528 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 KRT15P19012 456 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 NMBRP28336 390 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 PMLP29590 882 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 VIPR1P32241 457 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC8A1P32418 973 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 SERPINB9P50453 376 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 TMPRSS15P98073 1019 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MESP2Q0VG99 397 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 CBLBQ13191 982 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 TMED2Q15363 201 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 KBTBD12Q3ZCT8 623 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 FASTKD1Q53R41 847 aaKnown RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 C9orf64Q5T6V5 341 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 STEAP4Q687X5 459 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 KIAA0930Q6ICG6 404 aaPredicted RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 FSTL4Q6MZW2 842 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MRNIPQ6NTE8 343 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 TXNDC11Q6PKC3 985 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 CES3Q6UWW8 571 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 CACUL1Q86Y37 369 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MMAAQ8IVH4 418 aaKnown RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 LMNTD2Q8IXW0 634 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 TXNDC5Q8NBS9 432 aaKnown RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 OR2T3Q8NH03 318 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 OR2W6PQ8NHA6 318 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 RPLP0P6Q8NHW5 317 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 CXorf40AQ8TE69 158 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 RAB7BQ96AH8 199 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MFSD3Q96ES6 412 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 SCRN2Q96FV2 425 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 NELL2Q99435 816 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 PAFAH2Q99487 392 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MFSD1Q9H3U5 465 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MTG2Q9H4K7 406 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 ZDHHC4Q9NPG8 344 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 PRSS16Q9NQE7 514 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 POLR3BQ9NW08 1133 aaPredicted RBP10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 WNT16Q9UBV4 365 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 RIMKLBQ9ULI2 386 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 ARL5AQ9Y689 179 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 WASF2Q9Y6W5 498 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 MYLKQ15746 1914 aa10.3□□□□□ -0.76
PRPF38A-202ENST00000474048 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 MAP2K7O14733 419 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC7A4O43246 635 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 FZD6O60353 706 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ALDH1A2O94788 518 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 PRKCGP05129 697 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ELFN1P0C7U0 828 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ITGALP20701 1170 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 C5AR1P21730 350 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CNTFP26441 200 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 HNF1BP35680 557 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 KIR2DL1P43626 348 aaPredicted RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SLCO1A2P46721 670 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC12A2P55011 1212 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 GPX6P59796 221 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 FRG1Q14331 258 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CST6Q15828 149 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CNGA3Q16281 694 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ZRANB3Q5FWF4 1079 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF470Q6ECI4 717 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ERN2Q76MJ5 926 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 LYSMD3Q7Z3D4 306 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 TMEM135Q86UB9 458 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SLC26A11Q86WA9 606 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 IGDCC3Q8IVU1 814 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SFTPA1Q8IWL2 248 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 PGBD3Q8N328 593 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SYNPOQ8N3V7 929 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 OR4K2Q8NGD2 314 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 EPS8L3Q8TE67 593 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 PIH1D2Q8WWB5 315 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ECHDC3Q96DC8 303 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ERLEC1Q96DZ1 483 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 DNAJC1Q96KC8 554 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ACOX2Q99424 681 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CPNE1Q99829 537 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CCDC68Q9H2F9 335 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 IARS2Q9NSE4 1012 aaKnown RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 CATSPERZQ9NTU4 200 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 NLE1Q9NVX2 485 aaPredicted RBP10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF446Q9NWS9 450 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 VPS18Q9P253 973 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 FETUBQ9UGM5 382 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 TBK1Q9UHD2 729 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 APPL1Q9UKG1 709 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 SCML1Q9UN30 329 aa10.29□□□□□ -0.76
PRPF38A-202ENST00000474048 TSPAN11A1L157 253 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 MROH6A6NGR9 719 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 A8MX80 341 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 F8W8V4 182 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms