RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 PDS5AQ29RF7 1337 aaKnown RBP3.83□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KLRF2D3W0D1 207 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 EXTL3O43909 919 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DHX16O60231 1041 aaKnown RBP3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ITGAXP20702 1163 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 GPTP24298 496 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 HSD17B4P51659 736 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 EFR3AQ14156 821 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 EDRF1Q3B7T1 1238 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 FBXO47Q5MNV8 452 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 LDHAL6AQ6ZMR3 332 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KRBA2Q6ZNG9 492 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 HERC6Q8IVU3 1022 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TMEM57Q8N5G2 664 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ANKRD42Q8N9B4 389 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SLC24A4Q8NFF2 622 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 RILPL2Q969X0 211 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 LITAFQ99732 161 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KXD1Q9BQD3 176 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ITM2CQ9NQX7 267 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DERAQ9Y315 318 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 NFE2L3Q9Y4A8 694 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SMAD5-AS1Q9Y6J3 95 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 A3GALT2U3KPV4 340 aa3.82□□□□□ -1.8
UPP2-IT1-201ENST00000439185 HSPB2A8KAH6 182 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CHRM4P08173 479 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PPFIA1Q13136 1202 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 NEDD9Q14511 834 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 HSPB2Q16082 182 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CTXN3Q4LDR2 81 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ANKRD45Q5TZF3 282 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DENND1BQ6P3S1 775 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 GFRALQ6UXV0 394 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 MOB3CQ70IA8 216 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TMEM219Q86XT9 240 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SLC20A1Q8WUM9 679 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SNAPC3Q92966 411 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TRIM63Q969Q1 353 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CDCA5Q96FF9 252 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 C17orf75Q9HAS0 396 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PLEKHA5Q9HAU0 1116 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CISD1Q9NZ45 108 aaKnown RBP3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PCDHGB3Q9Y5G1 929 aa3.81□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TAF1P21675 1872 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 A0A0U1RQF3 1178 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ARHGAP10A1A4S6 786 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CBY3A6NI87 242 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 STX16-NPEPL1H3BU86 382 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 STX16O14662 325 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TMPOP42166 694 aaKnown RBP3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PAPOLAP51003 745 aaKnown RBP3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 NR1H2P55055 460 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PITX1P78337 314 aaPredicted RBP3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ITGADQ13349 1161 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SLC1A5Q15758 541 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KCNT1Q5JUK3 1230 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ARHGAP17Q68EM7 881 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ZNF497Q6ZNH5 498 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TBC1D26Q86UD7 250 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 C2CD5Q86YS7 1000 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CPXM2Q8N436 756 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 MORC4Q8TE76 937 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ZC3HAV1LQ96H79 300 aaKnown RBP3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ZNF583Q96ND8 569 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SLC32A1Q9H598 525 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 NOD2Q9HC29 1040 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PCDH9Q9HC56 1237 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CNGB3Q9NQW8 809 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 GPR52Q9Y2T5 361 aa3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 RRP7AQ9Y3A4 280 aaKnown RBP3.8□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TPD52L2O43399 206 aaKnown RBP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CEP104O60308 925 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 EIF3JO75822 258 aaKnown RBP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PCNAP12004 261 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 HSD3B1P14060 373 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PTPN2P17706 415 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 RXRAP19793 462 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CHATP28329 748 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KRT2P35908 639 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DHX8Q14562 1220 aaKnown RBP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KMT5CQ86Y97 462 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ANKRD18AQ8IVF6 992 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 CEP70Q8NHQ1 597 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ZSCAN31Q96LW9 406 aaPredicted RBP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PSMD1Q99460 953 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 PYM1Q9BRP8 204 aaKnown RBP3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 LMAN2LQ9H0V9 348 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 SMYD2Q9NRG4 433 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TINAGQ9UJW2 476 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DNAJC16Q9Y2G8 782 aa3.79□□□□□ -1.8
UPP2-IT1-201ENST00000439185 C17orf113A0A1B0GUU1 675 aa3.78□□□□□ -1.8
UPP2-IT1-201ENST00000439185 AKR1B15C9JRZ8 316 aaPredicted RBP3.78□□□□□ -1.8
UPP2-IT1-201ENST00000439185 DVL1O14640 695 aa3.78□□□□□ -1.8
UPP2-IT1-201ENST00000439185 KLK8O60259 260 aa3.78□□□□□ -1.8
UPP2-IT1-201ENST00000439185 ZNF500O60304 480 aaPredicted RBP3.78□□□□□ -1.8
UPP2-IT1-201ENST00000439185 TUBBP07437 444 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms