RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 HLTFQ14527 1009 aaKnown RBP eCLIP13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 MAP9Q49MG5 647 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 C14orf28Q4W4Y0 310 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 EFHC2Q5JST6 749 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 DNAAF5Q86Y56 855 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 ATL2Q8NHH9 583 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 CMKLR1Q99788 373 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 LGR4Q9BXB1 951 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 GANQ9H2C0 597 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 GPATCH2LQ9NWQ4 482 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 PCDHB11Q9Y5F2 797 aa13.86□□□□□ -0.19
UPK3BL1-201ENST00000340457 CACNB4O00305 520 aaPredicted RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 EPHB6O15197 1021 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 TEX33O43247 280 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 B4GAT1O43505 415 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 ALDH4A1P30038 563 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 YBEYP58557 167 aaPredicted RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 POLR2FP61218 127 aaKnown RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 B4GALNT1Q00973 533 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 RALGDSQ12967 914 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 PARP15Q460N3 678 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 COLEC12Q5KU26 742 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 ZNF677Q86XU0 584 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 ZSCAN1Q8NBB4 408 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 RCBTB1Q8NDN9 531 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 PMEPA1Q969W9 287 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 NUDT22Q9BRQ3 303 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 PDFQ9HBH1 243 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 FAM207AQ9NSI2 230 aaPredicted RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 SPATS2LQ9NUQ6 558 aaKnown RBP13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 ADAM22Q9P0K1 906 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 FZD10Q9ULW2 581 aa13.85□□□□□ -0.19
UPK3BL1-201ENST00000340457 RELNP78509 3460 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 ELFN1P0C7U0 828 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 UNGP13051 313 aaPredicted RBP13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 GM2AP17900 193 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 NSFP46459 744 aaKnown RBP13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 KIAA1024LP59773 190 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 AGERQ15109 404 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 BRAT1Q6PJG6 821 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 XKR5Q6UX68 686 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 LIPIQ6XZB0 460 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 SRLQ86TD4 932 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 PTRH1Q86Y79 214 aaKnown RBP13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 HCAR2Q8TDS4 363 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 ZNF641Q96N77 438 aaPredicted RBP13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 VPS16Q9H269 839 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
UPK3BL1-201ENST00000340457 UTP20O75691 2785 aaKnown RBP13.83□□□□□ -0.19
UPK3BL1-201ENST00000340457 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 TTC24A2A3L6 582 aaPredicted RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 NUDT21O43809 227 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PRAMEF11O60813 436 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PNLIPP16233 465 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 SOX5P35711 763 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 RPL7AP62424 266 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 TLE1Q04724 770 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 SRSF1Q07955 248 aaKnown RBP eCLIP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 ACOX1Q15067 660 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 SARM1Q6SZW1 724 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 ZNF574Q6ZN55 896 aaPredicted RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PIM3Q86V86 326 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PATE1Q8WXA2 126 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 TMEM159Q96B96 161 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 MCEEQ96PE7 176 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 SLC39A8Q9C0K1 460 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 LRRC19Q9H756 370 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 WDR26Q9H7D7 661 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 ATP13A3Q9H7F0 1226 aa13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 CARS2Q9HA77 564 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
UPK3BL1-201ENST00000340457 PRSS38A1L453 326 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 SIGLEC16A6NMB1 481 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 RHPN2P1A8MT19 583 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 PPFIA2O75334 1257 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 PALMO75781 387 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 CPNE6O95741 557 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 FUCA1P04066 466 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 TPM3P06753 285 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 SFTPCP11686 197 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 KELP23276 732 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 MPSTP25325 297 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 SERPINA4P29622 427 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 ARSDP51689 593 aa13.82□□□□□ -0.2
UPK3BL1-201ENST00000340457 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms