RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 APOL4Q9BPW4 351 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 GPR63Q9BZJ6 419 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 WDR12Q9GZL7 423 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 SENP6Q9GZR1 1112 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 TAS2R13Q9NYV9 303 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HIST1H2AGP0C0S8 130 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HIST1H2ADP20671 130 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ADAM17P78536 824 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 LIPEQ05469 1076 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HIST1H2AHQ96KK5 128 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HBEGFQ99075 208 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HIST1H2AJQ99878 128 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 H2AFJQ9BTM1 129 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 HIPK3Q9H422 1215 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 CACYBPQ9HB71 228 aaKnown RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 OXSMQ9NWU1 459 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 ABI2Q9NYB9 513 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-209ENST00000564068 GMEB1Q9Y692 573 aa12.66□□□□□ -0.38
COMMD4-209ENST00000564068 SPATA31C2B4DYI2 1134 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MDM4O15151 490 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 LZTS3O60299 673 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TGFB3P10600 412 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 XPAP23025 273 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF829Q3KNS6 432 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TEX44Q53QW1 395 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GALNT5Q7Z7M9 940 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 HEXDCQ8WVB3 486 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MCRS1Q96EZ8 462 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 FBXL20Q96IG2 436 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TPD52L3Q96J77 140 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 PRICKLE1Q96MT3 831 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 PEBP4Q96S96 227 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CDC14AQ9UNH5 594 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 SEC22BO75396 215 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MT-CYBP00156 380 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 FTH1P02794 183 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CDK4P11802 303 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 SERPINH1P50454 418 aaKnown RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CCNYL2Q5T2Q4 361 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GPC2Q8N158 579 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 AMER2Q8N7J2 671 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 DNERQ8NFT8 737 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 SOX17Q9H6I2 414 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 RASSF1Q9NS23 344 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 EHD3Q9NZN3 535 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 IGSF9Q9P2J2 1179 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GMPPBQ9Y5P6 360 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 H3BMM5 538 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 H3BRB1 525 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GPR25O00155 361 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 FBXO21O94952 628 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 AP2A1O95782 977 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MSH3P20585 1137 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 IL12AP29459 219 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CAPGP40121 348 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MAGEA8P43361 318 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ASPAP45381 313 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 RENBPP51606 427 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 PRKCQQ04759 706 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GK3PQ14409 553 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 CCDC142Q17RM4 750 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 GPR158Q5T848 1215 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ISOC1Q96CN7 298 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 TUT1Q9H6E5 874 aaKnown RBP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
COMMD4-209ENST00000564068 WDR37Q9Y2I8 494 aa12.65□□□□□ -0.38
COMMD4-209ENST00000564068 G3V2T6 193 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 HTRA2O43464 458 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-209ENST00000564068 RECQL4O94761 1208 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 THRBP10828 461 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-209ENST00000564068 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 SLC44A2Q8IWA5 706 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-209ENST00000564068 TMEM192Q8IY95 271 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 BHMTQ93088 406 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 IFT80Q9P2H3 777 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-209ENST00000564068 EBF1Q9UH73 591 aa12.64□□□□□ -0.39
COMMD4-209ENST00000564068 SLC13A4Q9UKG4 626 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms