RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 C1orf74Q96LT6 269 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 FAM110AQ9BQ89 295 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 TMEM79Q9BSE2 394 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 POLDIP3Q9BY77 421 aaKnown RBP5.75□□□□□ -1.49
MARK3-220ENST00000560417 FTOQ9C0B1 505 aaKnown RBP eCLIP5.75□□□□□ -1.49
MARK3-220ENST00000560417 BPIFA1Q9NP55 256 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 PLSCR4Q9NRQ2 329 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 ZBTB40Q9NUA8 1239 aa5.75□□□□□ -1.49
MARK3-220ENST00000560417 ZNF215Q9UL58 517 aaPredicted RBP5.75□□□□□ -1.49
MARK3-220ENST00000560417 TIMM44O43615 452 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 PGM3O95394 542 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 MMP2P08253 660 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 CHATP28329 748 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ACTN2P35609 894 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 C21orf58P58505 322 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ADORA2A-AS1P86434 159 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 EPS8Q12929 822 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 USP41Q3LFD5 358 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 RILPL1Q5EBL4 403 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 PLEKHS1Q5SXH7 462 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 C6orf141Q5SZD1 244 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 GKAP1Q5VSY0 366 aaPredicted RBP5.74□□□□□ -1.49
MARK3-220ENST00000560417 HIST2H2BCQ6DN03 193 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 HIST2H2BDQ6DRA6 164 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 TMEM154Q6P9G4 183 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 DLK2Q6UY11 383 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 CHST9Q7L1S5 443 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 LINGO2Q7L985 606 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 TRAPPC11Q7Z392 1133 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ZBTB2Q8N680 514 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ZNF548Q8NEK5 533 aaPredicted RBP5.74□□□□□ -1.49
MARK3-220ENST00000560417 BEST2Q8NFU1 509 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 SGCDQ92629 289 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 ARHGEF26Q96DR7 871 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 SLC41A2Q96JW4 573 aa5.74□□□□□ -1.49
MARK3-220ENST00000560417 SIRT3Q9NTG7 399 aaPredicted RBP5.74□□□□□ -1.49
MARK3-220ENST00000560417 BTBD18B2RXH4 712 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 I6L893 689 aaPredicted RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 FIBPO43427 364 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 HNRNPCL1O60812 293 aaKnown RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
MARK3-220ENST00000560417 TSPAN9O75954 239 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 RGS11O94810 467 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 HSP90AA1P07900 732 aaKnown RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 TFPIP10646 304 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 MMP13P45452 471 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 ME1P48163 572 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 CDH8P55286 799 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 KLF9Q13886 244 aaPredicted RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 ARHGEF6Q15052 776 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 ZNF284Q2VY69 593 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 DCAF6Q58WW2 860 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 WASHC2DQ5SRD0 308 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 MANEAQ5SRI9 462 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 GALNT5Q7Z7M9 940 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 WDR63Q8IWG1 891 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 SRBD1Q8N5C6 995 aaKnown RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 PGAM5Q96HS1 289 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 TMEM68Q96MH6 324 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 SPRTNQ9H040 489 aaPredicted RBP5.73□□□□□ -1.49
MARK3-220ENST00000560417 ISCUQ9H1K1 167 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 SH2D4AQ9H788 454 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 CYSLTR2Q9NS75 346 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 MTMR6Q9Y217 621 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 CEPT1Q9Y6K0 416 aa5.73□□□□□ -1.49
MARK3-220ENST00000560417 COL3A1P02461 1466 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 CDRT15L2A8MXV6 281 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 HCRTR2O43614 444 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 TMCC2O75069 709 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 SOX30O94993 753 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 NKX2-2O95096 273 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 KRT10P13645 584 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ARSBP15848 533 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ZNF182P17025 639 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 GABRB1P18505 474 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 THPOP40225 353 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 COMPP49747 757 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 CHAF1BQ13112 559 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 C2orf68Q2NKX9 166 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ASTE1Q2TB18 679 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 RAB41Q5JT25 222 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 DCAF12L2Q5VW00 463 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ANKRD54Q6NXT1 300 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ENOSF1Q7L5Y1 443 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 TICAM1Q8IUC6 712 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 MB21D2Q8IYB1 491 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 NANOGP1Q8N7R0 232 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 RPL36ALQ969Q0 106 aaKnown RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 OTULINQ96BN8 352 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 URB1-AS1Q96HZ7 61 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 GFM1Q96RP9 751 aaKnown RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 TMEM47Q9BQJ4 181 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 CLK4Q9HAZ1 481 aaKnown RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 RANGRFQ9HD47 186 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 MKKSQ9NPJ1 570 aaPredicted RBP5.72□□□□□ -1.49
MARK3-220ENST00000560417 RRP7BPQ9NSQ0 103 aa5.72□□□□□ -1.49
MARK3-220ENST00000560417 ANKEF1Q9NU02 776 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms