RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
ATM-222ENST00000533733 OR1E1P30953 314 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 GRK4P32298 578 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 USP46P62068 366 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 DSC2Q02487 901 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TAF10Q12962 218 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TRIM32Q13049 653 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 RBM20Q5T481 1227 aaKnown RBP12.01□□□□□ -0.49
ATM-222ENST00000533733 FAM171A1Q5VUB5 890 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 RAP1GAP2Q684P5 730 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 KLHDC10Q6PID8 442 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 HACD2Q6Y1H2 254 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 HPS6Q86YV9 775 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 OR6P1Q8NGX9 317 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TCF12Q99081 682 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
ATM-222ENST00000533733 ATXN3LQ9H3M9 355 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.01□□□□□ -0.49
ATM-222ENST00000533733 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
ATM-222ENST00000533733 PCDHB7Q9Y5E2 793 aa12.01□□□□□ -0.49
ATM-222ENST00000533733 F8W810 466 aa12□□□□□ -0.49
ATM-222ENST00000533733 TBC1D4O60343 1298 aa12□□□□□ -0.49
ATM-222ENST00000533733 B4GALT3O60512 393 aa12□□□□□ -0.49
ATM-222ENST00000533733 PDE5AO76074 875 aa12□□□□□ -0.49
ATM-222ENST00000533733 CNTN5O94779 1100 aa12□□□□□ -0.49
ATM-222ENST00000533733 NDST3O95803 873 aa12□□□□□ -0.49
ATM-222ENST00000533733 PIM1P11309 404 aaPredicted RBP12□□□□□ -0.49
ATM-222ENST00000533733 SELPP16109 830 aa12□□□□□ -0.49
ATM-222ENST00000533733 CD9P21926 228 aa12□□□□□ -0.49
ATM-222ENST00000533733 PSMA3P25788 255 aa12□□□□□ -0.49
ATM-222ENST00000533733 ETFBP38117 255 aa12□□□□□ -0.49
ATM-222ENST00000533733 ACADVLP49748 655 aa12□□□□□ -0.49
ATM-222ENST00000533733 CDH4P55283 916 aa12□□□□□ -0.49
ATM-222ENST00000533733 SULT2A1Q06520 285 aa12□□□□□ -0.49
ATM-222ENST00000533733 BFSP2Q13515 415 aa12□□□□□ -0.49
ATM-222ENST00000533733 ZNF460Q14592 562 aa12□□□□□ -0.49
ATM-222ENST00000533733 PDCD2Q16342 344 aaPredicted RBP12□□□□□ -0.49
ATM-222ENST00000533733 CUZD1Q86UP6 607 aa12□□□□□ -0.49
ATM-222ENST00000533733 AGR3Q8TD06 166 aa12□□□□□ -0.49
ATM-222ENST00000533733 PXYLP1Q8TE99 480 aa12□□□□□ -0.49
ATM-222ENST00000533733 PYDC1Q8WXC3 89 aa12□□□□□ -0.49
ATM-222ENST00000533733 IGSF8Q969P0 613 aa12□□□□□ -0.49
ATM-222ENST00000533733 HDAC10Q969S8 669 aa12□□□□□ -0.49
ATM-222ENST00000533733 CATSPER2Q96P56 530 aa12□□□□□ -0.49
ATM-222ENST00000533733 OLFM1Q99784 485 aa12□□□□□ -0.49
ATM-222ENST00000533733 SEMA3CQ99985 751 aa12□□□□□ -0.49
ATM-222ENST00000533733 Q9H521 79 aa12□□□□□ -0.49
ATM-222ENST00000533733 TFB2MQ9H5Q4 396 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 WDR41Q9HAD4 459 aa12□□□□□ -0.49
ATM-222ENST00000533733 PDFQ9HBH1 243 aa12□□□□□ -0.49
ATM-222ENST00000533733 HSFX1Q9UBD0 423 aa12□□□□□ -0.49
ATM-222ENST00000533733 SARDHQ9UL12 918 aa12□□□□□ -0.49
ATM-222ENST00000533733 COPG1Q9Y678 874 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 TRIM38O00635 465 aa12□□□□□ -0.49
ATM-222ENST00000533733 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 ACSL4O60488 711 aa12□□□□□ -0.49
ATM-222ENST00000533733 GPC4O75487 556 aa12□□□□□ -0.49
ATM-222ENST00000533733 GNRH1P01148 92 aa12□□□□□ -0.49
ATM-222ENST00000533733 FGF4P08620 206 aa12□□□□□ -0.49
ATM-222ENST00000533733 UQCRBP14927 111 aa12□□□□□ -0.49
ATM-222ENST00000533733 RAG1P15918 1043 aa12□□□□□ -0.49
ATM-222ENST00000533733 HSPA13P48723 471 aa12□□□□□ -0.49
ATM-222ENST00000533733 SLC11A2P49281 568 aa12□□□□□ -0.49
ATM-222ENST00000533733 MAXP61244 160 aa12□□□□□ -0.49
ATM-222ENST00000533733 SP3Q02447 781 aa12□□□□□ -0.49
ATM-222ENST00000533733 MED21Q13503 144 aa12□□□□□ -0.49
ATM-222ENST00000533733 FLOT2Q14254 428 aa12□□□□□ -0.49
ATM-222ENST00000533733 ZNF423Q2M1K9 1284 aa12□□□□□ -0.49
ATM-222ENST00000533733 TYSND1Q2T9J0 566 aa12□□□□□ -0.49
ATM-222ENST00000533733 RARS2Q5T160 578 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 OGFRL1Q5TC84 451 aaPredicted RBP12□□□□□ -0.49
ATM-222ENST00000533733 IRAK1BP1Q5VVH5 260 aa12□□□□□ -0.49
ATM-222ENST00000533733 CHST9Q7L1S5 443 aa12□□□□□ -0.49
ATM-222ENST00000533733 PTAR1Q7Z6K3 402 aaPredicted RBP12□□□□□ -0.49
ATM-222ENST00000533733 HOMEZQ8IX15 550 aa12□□□□□ -0.49
ATM-222ENST00000533733 PQLC1Q8N2U9 271 aa12□□□□□ -0.49
ATM-222ENST00000533733 PLD4Q96BZ4 506 aa12□□□□□ -0.49
ATM-222ENST00000533733 CCDC124Q96CT7 223 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 RCN3Q96D15 328 aa12□□□□□ -0.49
ATM-222ENST00000533733 KLHL5Q96PQ7 755 aa12□□□□□ -0.49
ATM-222ENST00000533733 CYP2S1Q96SQ9 504 aa12□□□□□ -0.49
ATM-222ENST00000533733 MGME1Q9BQP7 344 aa12□□□□□ -0.49
ATM-222ENST00000533733 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
ATM-222ENST00000533733 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
ATM-222ENST00000533733 PFDN4Q9NQP4 134 aa12□□□□□ -0.49
ATM-222ENST00000533733 CATSPERZQ9NTU4 200 aa12□□□□□ -0.49
ATM-222ENST00000533733 SUCOQ9UBS9 1254 aaKnown RBP12□□□□□ -0.49
ATM-222ENST00000533733 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
ATM-222ENST00000533733 SUFUQ9UMX1 484 aa12□□□□□ -0.49
ATM-222ENST00000533733 BBIP1A8MTZ0 92 aa11.99□□□□□ -0.49
ATM-222ENST00000533733 UBDO15205 165 aa11.99□□□□□ -0.49
ATM-222ENST00000533733 TLR5O60602 858 aa11.99□□□□□ -0.49
ATM-222ENST00000533733 VPS4BO75351 444 aa11.99□□□□□ -0.49
ATM-222ENST00000533733 CLDN11O75508 207 aa11.99□□□□□ -0.49
ATM-222ENST00000533733 BCAS2O75934 225 aaPredicted RBP11.99□□□□□ -0.49
ATM-222ENST00000533733 F7P08709 466 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms