RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 PLA2G15Q8NCC3 412 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 FATE1Q969F0 183 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 FUBP1Q96AE4 644 aaKnown RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 HDAC11Q96DB2 347 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 IFT43Q96FT9 208 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 TCEAL2Q9H3H9 227 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 B4GALT6Q9UBX8 382 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 C1QTNF9BB2RNN3 333 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 FFAR2O15552 330 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 LZTS3O60299 673 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 PGLSO95336 258 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 LDOC1O95751 146 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 HLA-DQB2P05538 268 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 KRT10P13645 584 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 NME1P15531 152 aaKnown RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 CDKN2BP42772 138 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 DYNLT1P63172 113 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 NIPAL4Q0D2K0 466 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 TAZQ16635 292 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 ALG1LQ6GMV1 187 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 TIGD7Q6NT04 549 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 PARGQ86W56 976 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 PELI3Q8N2H9 469 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 ARRDC2Q8TBH0 407 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 C1QTNF7Q9BXJ2 289 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 LACRTQ9GZZ8 138 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 SAE1Q9UBE0 346 aaPredicted RBP13.03□□□□□ -0.32
XRN1-203ENST00000463916 TTLL3Q9Y4R7 772 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 OR1A2Q9Y585 309 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 IGF2RP11717 2491 aa13.03□□□□□ -0.32
XRN1-203ENST00000463916 USP24Q9UPU5 2620 aa13.02□□□□□ -0.32
XRN1-203ENST00000463916 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 ENC1O14682 589 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 SIGLEC6O43699 453 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 FZD6O60353 706 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 JCHAINP01591 159 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 ELFN1P0C7U0 828 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 MYF5P13349 255 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 MX2P20592 715 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 LHCGRP22888 699 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 KCTD16Q68DU8 428 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 RBFAQ8N0V3 343 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 CBARPQ8N350 705 aaPredicted RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 TPCN2Q8NHX9 752 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 KRT35Q92764 455 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 OLFM3Q96PB7 478 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 MAK16Q9BXY0 300 aaKnown RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 POLR1EQ9GZS1 481 aaKnown RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
XRN1-203ENST00000463916 NEUROG3Q9Y4Z2 214 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 PTPRBP23467 1997 aa13.02□□□□□ -0.33
XRN1-203ENST00000463916 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CFAP69A5D8W1 941 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 NPIPB15A6NHN6 443 aaPredicted RBP13.01□□□□□ -0.33
XRN1-203ENST00000463916 APOL1O14791 398 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CPP00450 1065 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 ALPIP09923 528 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CTPS1P17812 591 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 THOP1P52888 689 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 YPEL5P62699 121 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CNGA3Q16281 694 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 DHRS13Q6UX07 377 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 TSPAN33Q86UF1 283 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 ZNF548Q8NEK5 533 aaPredicted RBP13.01□□□□□ -0.33
XRN1-203ENST00000463916 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
XRN1-203ENST00000463916 GATA6Q92908 595 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PHTF1Q9UMS5 762 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 MSRB2Q9Y3D2 182 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PLXNB3Q9ULL4 1909 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 ZFHX4Q86UP3 3567 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 K7ESM1 405 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PSTPIP1O43586 416 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 GCATO75600 419 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PRLP01236 227 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PCCBP05166 539 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 MMP2P08253 660 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 JUNDP17535 347 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 ACADVLP49748 655 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms