RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	PRMT7	Q9NVM4	692 aa	Predicted RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	MIOS	Q9NXC5	875 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	DTL	Q9NZJ0	730 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM216	Q9P0N5	145 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	RCOR3	Q9P2K3	495 aa	Predicted RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ATXN10	Q9UBB4	475 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PADI4	Q9UM07	663 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	APOBEC2	Q9Y235	224 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	GIT1	Q9Y2X7	761 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	DTNA	Q9Y4J8	743 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	NME7	Q9Y5B8	376 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PSAT1	Q9Y617	370 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	C2CD4D	B7Z1M9	353 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033		G3V2L1	256 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	INPPL1	O15357	1258 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	ICMT	O60725	284 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	OPHN1	O60890	802 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	H2AFY	O75367	372 aa	Known RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SOD2	P04179	222 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	P4HA1	P13674	534 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	TFE3	P19532	575 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	MGAT1	P26572	445 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	PIK3R1	P27986	724 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	ADSL	P30566	484 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SDC4	P31431	198 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	MLH1	P40692	756 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SCNN1G	P51170	649 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	CLCN4	P51793	760 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	LIMK2	P53671	638 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	EPHB1	P54762	984 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	LAMB3	Q13751	1172 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	RFTN1	Q14699	578 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	KYAT1	Q16773	422 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	CDO1	Q16878	200 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC10A6	Q3KNW5	377 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	CCDC153	Q494R4	210 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	FSCB	Q5H9T9	825 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SPANXN3	Q5MJ09	141 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	COX20	Q5RI15	118 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	GRTP1	Q5TC63	336 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	OTUD1	Q5VV17	481 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	KIAA0319	Q5VV43	1072 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	KIAA1841	Q6NSI8	718 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	PMF1	Q6P1K2	205 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	BORA	Q6PGQ7	559 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	CDR2L	Q86X02	465 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	NT5DC4	Q86YG4	428 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZDHHC17	Q8IUH5	632 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	DEFB107A	Q8IZN7	70 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	AHI1	Q8N157	1196 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	B4GALNT2	Q8NHY0	566 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	PPP1R14C	Q8TAE6	165 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	PPP4R1	Q8TF05	950 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC35F5	Q8WV83	523 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	EZH1	Q92800	747 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	ASIC4	Q96FT7	647 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	RBBP8	Q99708	897 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRRX2	Q99811	253 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	CPNE1	Q99829	537 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	NAT9	Q9BTE0	207 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	MRPS26	Q9BYN8	205 aa	Known RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	NXF3	Q9H4D5	531 aa	Known RBP	7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	SYBU	Q9NX95	663 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	KLK14	Q9P0G3	267 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	IGSF9	Q9P2J2	1179 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	DPP7	Q9UHL4	492 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	DNMT3L	Q9UJW3	386 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	RAB26	Q9ULW5	256 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	HEY1	Q9Y5J3	304 aa		7.91	□□□□□ -1.14
SPIDR-223	ENST00000524033	BRWD1	Q9NSI6	2320 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARHGAP42	A6NI28	874 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	VILL	O15195	856 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	MFSD11	O43934	449 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	DNAJA2	O60884	412 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	TADA2A	O75478	443 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	GRAP2	O75791	330 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZNF189	O75820	626 aa	Predicted RBP	7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	MAP3K6	O95382	1288 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	ASL	P04424	464 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	TFAP2A	P05549	437 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	UROD	P06132	367 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	KRT19	P08727	400 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	RALB	P11234	206 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	CPA3	P15088	417 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	MX2	P20592	715 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	GARS	P41250	739 aa	Known RBP	7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	ALDH1A3	P47895	512 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	GLUD2	P49448	558 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	RGS7	P49802	495 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	SERPINB8	P50452	374 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRKAA2	P54646	552 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	CSE1L	P55060	971 aa	Known RBP	7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	DSC1	Q08554	894 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM132D	Q14C87	1099 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	TRIP10	Q15642	601 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZNF423	Q2M1K9	1284 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC9B1	Q4ZJI4	515 aa		7.9	□□□□□ -1.14
SPIDR-223	ENST00000524033	PIGG	Q5H8A4	983 aa		7.9	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms