RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DSG4Q86SJ6 1040 aa4.22□□□□□ -1.73
SMC4-219ENST00000487747 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
SMC4-219ENST00000487747 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
SMC4-219ENST00000487747 FBRSL1Q9HCM7 1045 aaKnown RBP4.22□□□□□ -1.73
SMC4-219ENST00000487747 TYW5A2RUC4 315 aaKnown RBP4.21□□□□□ -1.74
SMC4-219ENST00000487747 B9A039 149 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 KLRF2D3W0D1 207 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 TIMP3P35625 211 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 AARSP49588 968 aaKnown RBP eCLIP4.21□□□□□ -1.743e-49■■■■■ 252.4
SMC4-219ENST00000487747 MCM2P49736 904 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 SLC20A2Q08357 652 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 GOLGA8FQ08AF8 430 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 TRIM14Q14142 442 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 ARHGEF6Q15052 776 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 DENND1BQ6P3S1 775 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 WDR73Q6P4I2 378 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 CCDC174Q6PII3 467 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 IL20RBQ6UXL0 311 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 SFR1Q86XK3 245 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 VPS37AQ8NEZ2 397 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 GJC3Q8NFK1 279 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 THAP4Q8WY91 577 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 RND1Q92730 232 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 TMEM19Q96HH6 336 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 MMTAG2Q9BU76 263 aaKnown RBP4.21□□□□□ -1.74
SMC4-219ENST00000487747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.21□□□□□ -1.747e-7■■□□□ 12.7
SMC4-219ENST00000487747 TRMT61BQ9BVS5 477 aaKnown RBP4.21□□□□□ -1.74
SMC4-219ENST00000487747 GFRA4Q9GZZ7 299 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 SAYSD1Q9NPB0 183 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 PLCB1Q9NQ66 1216 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 C1RLQ9NZP8 487 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 VDAC3Q9Y277 283 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 DNAJC16Q9Y2G8 782 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 DERAQ9Y315 318 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 DAAM1Q9Y4D1 1078 aa4.21□□□□□ -1.74
SMC4-219ENST00000487747 A0A0U1RQF3 1178 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.2□□□□□ -1.74
SMC4-219ENST00000487747 C16orf97H3BN30 126 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 FGF17O60258 216 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 TK1P04183 234 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 ATP1A1P05023 1023 aaKnown RBP4.2□□□□□ -1.74
SMC4-219ENST00000487747 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 TNNT1P13805 278 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 GM2AP17900 193 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 EDN2P20800 178 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 HNRNPH1P31943 449 aaKnown RBP4.2□□□□□ -1.74
SMC4-219ENST00000487747 ATP12AP54707 1039 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
SMC4-219ENST00000487747 C19orf48Q6RUI8 117 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 SLC26A9Q7LBE3 791 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 AFG1LQ8WV93 481 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 SNAPC3Q92966 411 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 FBXO17Q96EF6 278 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 TWNKQ96RR1 684 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 ZNF696Q9H7X3 374 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 ZNF334Q9HCZ1 680 aaPredicted RBP4.2□□□□□ -1.74
SMC4-219ENST00000487747 NFE2L3Q9Y4A8 694 aa4.2□□□□□ -1.74
SMC4-219ENST00000487747 PABPN1LA6NDY0 278 aaKnown RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 FAM90A7PA6NKC0 464 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 FAM90A22PA8MWA6 464 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 FAM90A12PA8MX19 464 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 FAM90A23PA8MXZ1 464 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 PLRG1O43660 514 aaKnown RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 KLK8O60259 260 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CEP104O60308 925 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CHRM4P08173 479 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CETPP11597 493 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 SRCP12931 536 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 RXRAP19793 462 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CLDN2P57739 230 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 ECT2LQ008S8 904 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 POSTNQ15063 836 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 ATP13A5Q4VNC0 1218 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 C17orf99Q6UX52 265 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 FOXRED2Q8IWF2 684 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CPXM2Q8N436 756 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 CTCFLQ8NI51 663 aaPredicted RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 STN1Q9H668 368 aaKnown RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 CISD1Q9NZ45 108 aaKnown RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 TINAGQ9UJW2 476 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 PCDHGB5Q9Y5G0 923 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 A3GALT2U3KPV4 340 aa4.19□□□□□ -1.74
SMC4-219ENST00000487747 PDS5AQ29RF7 1337 aaKnown RBP4.19□□□□□ -1.74
SMC4-219ENST00000487747 MCM3P25205 808 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 TAF6P49848 677 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 RUNX2Q13950 521 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 SYT16Q17RD7 645 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 MMEL1Q495T6 779 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 ACCSLQ4AC99 568 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 CTXN3Q4LDR2 81 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 NOXA1Q86UR1 476 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 MOGAT3Q86VF5 341 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 SUGP1Q8IWZ8 645 aaKnown RBP4.18□□□□□ -1.74
SMC4-219ENST00000487747 BBS10Q8TAM1 723 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 RAB40AQ8WXH6 277 aa4.18□□□□□ -1.74
SMC4-219ENST00000487747 CNOT9Q92600 299 aaKnown RBP4.18□□□□□ -1.74
SMC4-219ENST00000487747 SDCCAG3Q96C92 435 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms