RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 FJX1Q86VR8 437 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 OSTM1Q86WC4 334 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3Q8IZP1 549 aaPredicted RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 LILRB2Q8N423 598 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PDCL2Q8N4E4 241 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 UBE2Q2Q8WVN8 375 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TMEM158Q8WZ71 300 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 BMFQ96LC9 184 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TSPAN18Q96SJ8 248 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PYM1Q9BRP8 204 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 DHRS4Q9BTZ2 278 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 DDA1Q9BW61 102 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 CPEB1Q9BZB8 566 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ENKD1Q9H0I2 346 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 POLD4Q9HCU8 107 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 MBNL3Q9NUK0 354 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 AP5S1Q9NUS5 200 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 DNAJC28Q9NX36 388 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 IL37Q9NZH6 218 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PLA2G4CQ9UP65 541 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 POLHQ9Y253 713 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TRBV23-1A0A0A0MS06 115 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SPTY2D1-AS1A0A0U1RR47 76 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 INAFM1C9JVW0 142 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 PRODHO43272 600 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 CLTAP09496 248 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 IRF1P10914 325 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 IFNGR1P15260 489 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 CYP11B2P19099 503 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 BDNFP23560 247 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 GNA11P29992 359 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 RABIFP47224 123 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 KRT83P78385 493 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 CDK18Q07002 472 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 ERV3-1Q14264 604 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SLC14A2Q15849 920 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 FNDC3BQ53EP0 1204 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 PDLIM3Q53GG5 364 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 TPRG1LQ5T0D9 272 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 PPP4R3AQ6IN85 833 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 CWC27Q6UX04 472 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 GCNT7Q6ZNI0 430 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 Q6ZSR6 202 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 MRGPRGQ86SM5 289 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 ATG4DQ86TL0 474 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 KCNMB4Q86W47 210 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SPATA2LQ8IUW3 424 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 MMAAQ8IVH4 418 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 ZNF808Q8N4W9 903 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 NLGN4YQ8NFZ3 816 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 NCOA7Q8NI08 942 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 KIAA1143Q96AT1 154 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 C8orf48Q96LL4 319 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 OMDQ99983 421 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 EIF2AK1Q9BQI3 630 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 TCHPQ9BT92 498 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 MCMBPQ9BTE3 642 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 G6PC3Q9BUM1 346 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SLC25A23Q9BV35 468 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 MRPL4Q9BYD3 311 aaKnown RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SLC2A11Q9BYW1 496 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 CLPBQ9H078 707 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SLKQ9H2G2 1235 aaPredicted RBP5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SYNDIG1Q9H7V2 258 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 ERVK13-1Q9NX77 482 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 EHD2Q9NZN4 543 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 SUN2Q9UH99 717 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 APPL1Q9UKG1 709 aa5.4□□□□□ -1.54
SBDSP1-204ENST00000453858 NPHP3-ACAD11A0A0J9YXS1 232 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 FAM92AA1XBS5 289 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 FADS2P1A8MWK0 482 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 KPNA7A9QM74 516 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 F8VP50 259 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 SPRY1O43609 319 aaPredicted RBP5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 PLRG1O43660 514 aaKnown RBP5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 DPM1O60762 260 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 LRCH4O75427 683 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 TOM1L1O75674 476 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 CLSTN1O94985 981 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 HPXP02790 462 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 DLDP09622 509 aaKnown RBP5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 PTPN1P18031 435 aaKnown RBP5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 NAT1P18440 290 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 HLA-FP30511 346 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 ADSLP30566 484 aaPredicted RBP5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 STAT5AP42229 794 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 IRAK1P51617 712 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 METAP1P53582 386 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 PDE1AP54750 535 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 CORO7P57737 925 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 CLDN2P57739 230 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 TAS2R38P59533 333 aa5.39□□□□□ -1.55
SBDSP1-204ENST00000453858 MCL1Q07820 350 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms