RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TBR1Q16650 682 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 MAP9Q49MG5 647 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 FAM46DQ8NEK8 389 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 GPT2Q8TD30 523 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 RXFP2Q8WXD0 754 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 WDR92Q96MX6 357 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 KLC2Q9H0B6 622 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 RNF215Q9Y6U7 377 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 COL12A1Q99715 3063 aa17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 TLN1Q9Y490 2541 aaKnown RBP17.94■□□□□ 0.46
PDLIM4-202ENST00000379018 TMEM110-MUSTN1A8MSY1 372 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 NVLO15381 856 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 ITGB6P18564 788 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 WT1P19544 449 aaPredicted RBP17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 PEX5P50542 639 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 NOMO3P69849 1222 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 ELP6Q0PNE2 266 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 ARHGEF7Q14155 803 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 MAN2A1Q16706 1144 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 CCDC14Q49A88 953 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 TMEM52BQ4KMG9 183 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 COLEC12Q5KU26 742 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 ATL2Q8NHH9 583 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 JOSD2Q8TAC2 188 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 HMCESQ96FZ2 354 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 C11orf70Q9BRQ4 267 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 PCDH12Q9NPG4 1184 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 MRPL40Q9NQ50 206 aaKnown RBP17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 NEU3Q9UQ49 428 aa17.93■□□□□ 0.46
PDLIM4-202ENST00000379018 ZSCAN5CA6NGD5 496 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 SUV39H1O43463 412 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 LSM8O95777 96 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 LIG3P49916 1009 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 NRG1Q02297 640 aaPredicted RBP17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 AMZ1Q400G9 498 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 TMPRSS9Q7Z410 1059 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 SPRED1Q7Z699 444 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 PYROXD2Q8N2H3 581 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 PLA2G15Q8NCC3 412 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 GPR156Q8NFN8 814 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 OR6C4Q8NGE1 309 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 FAM172AQ8WUF8 416 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 SLC20A1Q8WUM9 679 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 HTR3CQ8WXA8 447 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 OR1E3Q8WZA6 343 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 CMKLR1Q99788 373 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 DKK3Q9UBP4 350 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 ACSL6Q9UKU0 697 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
PDLIM4-202ENST00000379018 ZFC3H1O60293 1989 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 ARHGEF17Q96PE2 2063 aaPredicted RBP17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 PPFIA2O75334 1257 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 CLCA4Q14CN2 919 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 CERCAMQ5T4B2 595 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 ERAP2Q6P179 960 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 PTRH1Q86Y79 214 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 SLC30A5Q8TAD4 765 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 RBM15Q96T37 977 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 NDST4Q9H3R1 872 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 SEMA6CQ9H3T2 930 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 DPEP2Q9H4A9 486 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 NOL6Q9H6R4 1146 aaKnown RBP17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 RDH14Q9HBH5 336 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 FGF22Q9HCT0 170 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 LRIT1Q9P2V4 623 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 LHX3Q9UBR4 397 aa17.91■□□□□ 0.46
PDLIM4-202ENST00000379018 CXorf51AA0A1B0GTR3 108 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 C9orf172C9J069 976 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 RASA4BC9J798 803 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 CACNB4O00305 520 aaPredicted RBP17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 RASA4O43374 803 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 CREB3O43889 395 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 SFTPCP11686 197 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 GLB1P16278 677 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 EPHB2P29323 1055 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 TLE1Q04724 770 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 ZFP36L1Q07352 338 aaKnown RBP17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 UGP2Q16851 508 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 C14orf28Q4W4Y0 310 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 KLHDC7AQ5VTJ3 777 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 XKR5Q6UX68 686 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 RCBTB1Q8NDN9 531 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 CCL4L1Q8NHW4 92 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 EPS8L1Q8TE68 723 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 TMEM168Q9H0V1 697 aa17.9■□□□□ 0.46
PDLIM4-202ENST00000379018 SDK2Q58EX2 2172 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 TMEM202A6NGA9 273 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 C2CD4BA6NLJ0 364 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 GFPT2O94808 682 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 MAZP56270 477 aaKnown RBP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 HDAC4P56524 1084 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 SRSF1Q07955 248 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 MTM1Q13496 603 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 C16orf72Q14CZ0 275 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 SPECC1LQ69YQ0 1117 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 DPY19L2P1Q6NXN4 242 aa17.89■□□□□ 0.45
PDLIM4-202ENST00000379018 SCYL2Q6P3W7 929 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms