RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pcdhb2Q91Y00 799 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tnip2Q99JG7 430 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 MmadhcQ99LS1 296 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fbxl20Q9CZV8 436 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 EtfbQ9DCW4 255 aaKnown RBP13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mettl7bQ9DD20 244 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 ApipQ9WVQ5 241 aa13.52□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zar1lC3VD30 291 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cntnap3E9PY62 1287 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Defa8P50706 81 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 HexdcQ3U4H6 486 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 P2rx3Q3UR32 397 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dennd2cQ6P9P8 914 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 ErfeQ6PGN1 340 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Jade1Q6ZPI0 834 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Samd4bQ80XS6 687 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pcid2Q8BFV2 399 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Msantd1Q8BIL2 278 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Grik4Q8BMF5 956 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 GrpQ8R1I2 146 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn1r205Q8R276 316 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nol6Q8R5K4 1152 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tmco4Q91WU4 631 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rxfp2Q91ZZ5 737 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dach2Q925Q8 634 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ddx50Q99MJ9 734 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ppp6cQ9CQR6 305 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zdhhc13Q9CWU2 622 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tnfsf13Q9D777 241 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Adam23Q9R1V7 829 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm45233A0A0N4SVE0 221 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Srp72F8VQC1 671 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Svs4P18419 113 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc2a3P32037 493 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cyp2f2P33267 491 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tlx1P43345 332 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Naa20P61600 178 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tuba4aP68368 448 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 TankP70347 448 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ldb1P70662 411 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Hddc2Q3SXD3 199 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 CamkvQ3UHL1 512 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pdap1Q3UHX2 181 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Jak2Q62120 1129 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Map3k10Q66L42 940 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cntn4Q69Z26 1026 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zfp512bQ6PHP4 879 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Clec7aQ6QLQ4 244 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pnma2Q8BHK0 365 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pcdh20Q8BIZ0 952 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vps26bQ8C0E2 336 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Guca1bQ8VBV8 201 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Exd2Q8VEG4 650 aaKnown RBP13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc5a2Q923I7 670 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 MvdQ99JF5 401 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Arhgap8Q9CXP4 425 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zcchc12Q9CZA5 402 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slamf8Q9D3G2 278 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam83dQ9D7I8 585 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Il23aQ9EQ14 196 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Trpc4Q9QUQ5 974 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc7a8Q9QXW9 531 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cdh13Q9WTR5 714 aa13.51□□□□□ -0.25
Nup88-201ENSMUST00000035283 Olfr675A0A1B0GSE1 317 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ttll8A4Q9F1 832 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ceacam3E9Q6J4 706 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn1r76F8VQ63 324 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 CrymO54983 313 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Hspa4lP48722 838 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Aarsd1Q3THG9 412 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 PoliQ6R3M4 717 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tas2r129Q7M709 320 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Sytl5Q80T23 753 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Itpk1Q8BYN3 419 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zfp617Q91WM0 559 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 DhddsQ99KU1 333 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Abcg3Q99P81 650 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc13a2Q9ES88 586 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Lama3Q61789 3330 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 9330159F19RikD3Z623 648 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mknk1O08605 427 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rdh7O88451 316 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mmp3P28862 477 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Sult1e1P49891 295 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Glp2rQ5IXF8 512 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Znf235Q61116 645 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Six4Q61321 775 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 CapslQ6P8Y1 208 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc35e2Q8C811 405 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 MrgpreQ91ZB7 310 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ctu1Q99J10 420 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Itfg1Q99KW9 610 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Nck1Q99M51 377 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pmf1Q9CPV5 202 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rsph14Q9D3W1 341 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Egfl7Q9QXT5 275 aa13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Twf2Q9Z0P5 349 aaKnown RBP13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Bag6Q9Z1R2 1154 aaKnown RBP13.5□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cacna1cQ01815 2139 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Klhl18A0A0G2JGN5 579 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms