RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR42, Length 351 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR42	snR42	DOT5	P40553	215 aa		4.26	□□□□□ -1.73
snR42	snR42	MTO1	P53070	669 aa		4.26	□□□□□ -1.73
snR42	snR42	AOS1	Q06624	347 aa		4.26	□□□□□ -1.73
snR42	snR42	SLM3	Q12093	417 aa		4.26	□□□□□ -1.73
snR42	snR42	URB1	P34241	1764 aa	Known RBP	4.26	□□□□□ -1.73
snR42	snR42	PRP40	P33203	583 aa	Known RBP	4.25	□□□□□ -1.73
snR42	snR42	YKL133C	P36066	463 aa		4.25	□□□□□ -1.73
snR42	snR42	UGA2	P38067	497 aa		4.25	□□□□□ -1.73
snR42	snR42	XKS1	P42826	600 aa		4.25	□□□□□ -1.73
snR42	snR42	YNL108C	P53929	270 aa		4.25	□□□□□ -1.73
snR42	snR42	UTP4	Q06679	776 aa	Known RBP	4.25	□□□□□ -1.73
snR42	snR42	TRP3	P00937	484 aa		4.24	□□□□□ -1.73
snR42	snR42	YEF3	P16521	1044 aa	Known RBP	4.24	□□□□□ -1.73
snR42	snR42	PKC1	P24583	1151 aa		4.24	□□□□□ -1.73
snR42	snR42	FOX2	Q02207	900 aa	Known RBP	4.24	□□□□□ -1.73
snR42	snR42	GAS4	Q08271	471 aa		4.24	□□□□□ -1.73
snR42	snR42	FKS3	Q04952	1785 aa		4.24	□□□□□ -1.73
snR42	snR42	RSF2	P46974	1380 aa		4.24	□□□□□ -1.73
snR42	snR42	ROM2	P51862	1356 aa	Known RBP	4.24	□□□□□ -1.73
snR42	snR42	YLR419W	Q06698	1435 aa	Known RBP	4.23	□□□□□ -1.73
snR42	snR42	ELM1	P32801	640 aa		4.23	□□□□□ -1.73
snR42	snR42	LIP5	P32875	414 aa		4.23	□□□□□ -1.73
snR42	snR42	LYS4	P49367	693 aa	Predicted RBP	4.23	□□□□□ -1.73
snR42	snR42	PRP43	P53131	767 aa	Known RBP	4.23	□□□□□ -1.73
snR42	snR42	YLR122C	Q12312	125 aa		4.23	□□□□□ -1.73
snR42	snR42	TSC13	Q99190	310 aa		4.23	□□□□□ -1.73
snR42	snR42	COB	P00163	385 aa		4.22	□□□□□ -1.73
snR42	snR42	CYT1	P07143	309 aa		4.22	□□□□□ -1.73
snR42	snR42	PDI1	P17967	522 aa	Known RBP	4.22	□□□□□ -1.73
snR42	snR42	RSC6	P25632	483 aa		4.22	□□□□□ -1.73
snR42	snR42	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
snR42	snR42	TOS1	P38288	455 aa		4.22	□□□□□ -1.73
snR42	snR42	APM2	P38700	605 aa		4.22	□□□□□ -1.73
snR42	snR42	CUS1	Q02554	436 aa	Predicted RBP	4.22	□□□□□ -1.73
snR42	snR42	SLP1	Q12232	587 aa		4.22	□□□□□ -1.73
snR42	snR42	YRF1-4	O13559	1382 aa		4.22	□□□□□ -1.73
snR42	snR42	KAP122	P32767	1081 aa		4.21	□□□□□ -1.74
snR42	snR42	RPN1	P38764	993 aa	Known RBP	4.21	□□□□□ -1.74
snR42	snR42	NPR2	P39923	615 aa		4.21	□□□□□ -1.74
snR42	snR42	MEC3	Q02574	474 aa		4.21	□□□□□ -1.74
snR42	snR42	EDE1	P34216	1381 aa		4.21	□□□□□ -1.74
snR42	snR42	MLP1	Q02455	1875 aa	Known RBP	4.21	□□□□□ -1.74
snR42	snR42	YRF1-3	P0CX14	1859 aa		4.2	□□□□□ -1.74
snR42	snR42	YRF1-7	P0CX15	1859 aa		4.2	□□□□□ -1.74
snR42	snR42	YRF1-6	P53819	1859 aa		4.2	□□□□□ -1.74
snR42	snR42	SCD5	P34758	872 aa		4.2	□□□□□ -1.74
snR42	snR42	CTH1	P47976	325 aa		4.2	□□□□□ -1.74
snR42	snR42	YNR040W	P53736	256 aa		4.2	□□□□□ -1.74
snR42	snR42	SAF1	P38352	637 aa		4.19	□□□□□ -1.74
snR42	snR42	ATG13	Q06628	738 aa		4.19	□□□□□ -1.74
snR42	snR42	BRE4	Q07660	1125 aa		4.19	□□□□□ -1.74
snR42	snR42	APC1	P53886	1748 aa		4.18	□□□□□ -1.74
snR42	snR42	YIL177C	P40434	1758 aa		4.18	□□□□□ -1.74
snR42	snR42	YJL225C	P40889	1758 aa		4.18	□□□□□ -1.74
snR42	snR42	RPC31	P17890	251 aa		4.18	□□□□□ -1.74
snR42	snR42	YKR075C	P36155	307 aa		4.18	□□□□□ -1.74
snR42	snR42	POL5	P39985	1022 aa	Known RBP	4.18	□□□□□ -1.74
snR42	snR42	MRX10	Q05648	414 aa		4.18	□□□□□ -1.74
snR42	snR42	YML133C	Q03099	1374 aa		4.17	□□□□□ -1.74
snR42	snR42	YLL067C	Q07888	1374 aa		4.17	□□□□□ -1.74
snR42	snR42	YLL066C	Q99208	1374 aa		4.17	□□□□□ -1.74
snR42	snR42	MRP10	O75012	95 aa		4.17	□□□□□ -1.74
snR42	snR42	CHS2	P14180	963 aa		4.17	□□□□□ -1.74
snR42	snR42	KAR2	P16474	682 aa	Known RBP	4.17	□□□□□ -1.74
snR42	snR42	GRX4	P32642	244 aa		4.17	□□□□□ -1.74
snR42	snR42	YGR130C	P53278	816 aa		4.17	□□□□□ -1.74
snR42	snR42	PAP2	P53632	584 aa	Known RBP	4.17	□□□□□ -1.74
snR42	snR42	ADE16	P54113	591 aa	Known RBP	4.17	□□□□□ -1.74
snR42	snR42	PDS5	Q04264	1277 aa		4.17	□□□□□ -1.74
snR42	snR42	HIM1	Q06674	414 aa		4.17	□□□□□ -1.74
snR42	snR42	SPT7	P35177	1332 aa		4.17	□□□□□ -1.74
snR42	snR42	TY4B-P	A0A0B7P3V8	1104 aa		4.16	□□□□□ -1.74
snR42	snR42	IDI1	P15496	288 aa		4.16	□□□□□ -1.74
snR42	snR42	NGR1	P32831	672 aa	Known RBP	4.16	□□□□□ -1.74
snR42	snR42	YER156C	P40093	338 aa	Known RBP	4.16	□□□□□ -1.74
snR42	snR42	ALD3	P54114	506 aa		4.16	□□□□□ -1.74
snR42	snR42	TY4A-H	Q6Q5P6	413 aa		4.16	□□□□□ -1.74
snR42	snR42	SNF2	P22082	1703 aa		4.15	□□□□□ -1.74
snR42	snR42	HXT5	P38695	592 aa		4.15	□□□□□ -1.75
snR42	snR42	TAP42	Q04372	366 aa		4.15	□□□□□ -1.75
snR42	snR42	MAG2	Q06436	670 aa	Known RBP	4.15	□□□□□ -1.75
snR42	snR42	BUG1	Q12191	341 aa		4.15	□□□□□ -1.75
snR42	snR42	TY1A-NL1	Q12391	440 aa	Known RBP	4.15	□□□□□ -1.75
snR42	snR42	SEC3	P33332	1336 aa	Known RBP	4.15	□□□□□ -1.75
snR42	snR42	SIR4	P11978	1358 aa		4.14	□□□□□ -1.75
snR42	snR42	SSA1	P10591	642 aa	Known RBP	4.14	□□□□□ -1.75
snR42	snR42	HSP104	P31539	908 aa	Known RBP	4.14	□□□□□ -1.75
snR42	snR42	UBP5	P39944	805 aa		4.14	□□□□□ -1.75
snR42	snR42	DSE4	P53753	1117 aa		4.14	□□□□□ -1.75
snR42	snR42	RPO41	P13433	1351 aa	Known RBP	4.14	□□□□□ -1.75
snR42	snR42	RIM15	P43565	1770 aa		4.13	□□□□□ -1.75
snR42	snR42	ENO1	P00924	437 aa	Known RBP	4.13	□□□□□ -1.75
snR42	snR42	OSM1	P21375	501 aa	Known RBP	4.13	□□□□□ -1.75
snR42	snR42	GRX1	P25373	110 aa	Known RBP	4.13	□□□□□ -1.75
snR42	snR42	PEP12	P32854	288 aa		4.13	□□□□□ -1.75
snR42	snR42	GIP2	P40036	548 aa		4.13	□□□□□ -1.75
snR42	snR42	TED1	P40533	473 aa		4.13	□□□□□ -1.75
snR42	snR42	SAP155	P43612	1002 aa		4.13	□□□□□ -1.75
snR42	snR42	SPO74	P45819	413 aa		4.13	□□□□□ -1.75
snR42	snR42	YBP2	P53169	641 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 148.4 ms