RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR13, Length 124 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR13	snR13	UTP22	P53254	1237 aa	Predicted RBP	4.11	□□□□□ -1.75
snR13	snR13	NCE103	P53615	221 aa		4.11	□□□□□ -1.75
snR13	snR13	OXR1	Q08952	273 aa		4.11	□□□□□ -1.75
snR13	snR13	YLL054C	Q12244	843 aa		4.11	□□□□□ -1.75
snR13	snR13	YLR122C	Q12312	125 aa		4.11	□□□□□ -1.75
snR13	snR13	CHS2	P14180	963 aa		4.1	□□□□□ -1.75
snR13	snR13	NAM7	P30771	971 aa	Known RBP	4.1	□□□□□ -1.75
snR13	snR13	RPT1	P33299	467 aa	Known RBP	4.1	□□□□□ -1.75
snR13	snR13	KAE1	P36132	386 aa		4.1	□□□□□ -1.75
snR13	snR13	SHU2	P38957	223 aa		4.1	□□□□□ -1.75
snR13	snR13	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
snR13	snR13	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.09	□□□□□ -1.75
snR13	snR13	TY1A-DR6	P0CX70	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-ER1	P0CX71	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-LR2	P0CX72	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-PL	P0CX73	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-JR1	P0CX74	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-LR3	P0CX75	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-ML2	P0CX76	440 aa		4.09	□□□□□ -1.75
snR13	snR13	RSM26	P47141	266 aa		4.09	□□□□□ -1.75
snR13	snR13	MEC3	Q02574	474 aa		4.09	□□□□□ -1.75
snR13	snR13	DOT1	Q04089	582 aa	Known RBP	4.09	□□□□□ -1.75
snR13	snR13	DAL4	Q04895	635 aa		4.09	□□□□□ -1.75
snR13	snR13	NOP8	Q08287	484 aa	Predicted RBP	4.09	□□□□□ -1.75
snR13	snR13	TY1A-GR1	Q12085	440 aa		4.09	□□□□□ -1.75
snR13	snR13	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.09	□□□□□ -1.75
snR13	snR13	TY1A-OL	Q92392	440 aa	Known RBP	4.09	□□□□□ -1.75
snR13	snR13	KAR2	P16474	682 aa	Known RBP	4.08	□□□□□ -1.76
snR13	snR13	UGA4	P32837	571 aa		4.08	□□□□□ -1.76
snR13	snR13	SQT1	P35184	431 aa		4.08	□□□□□ -1.76
snR13	snR13	MAC1	P35192	417 aa		4.08	□□□□□ -1.76
snR13	snR13	YKL077W	P36081	392 aa		4.08	□□□□□ -1.76
snR13	snR13	GPT2	P36148	743 aa		4.08	□□□□□ -1.76
snR13	snR13	REI1	P38344	393 aa	Predicted RBP	4.08	□□□□□ -1.76
snR13	snR13	GIC2	Q06648	383 aa		4.08	□□□□□ -1.76
snR13	snR13	ALG6	Q12001	544 aa	Known RBP	4.08	□□□□□ -1.76
snR13	snR13	EXO5	P38289	585 aa		4.07	□□□□□ -1.76
snR13	snR13	FAA3	P39002	694 aa		4.07	□□□□□ -1.76
snR13	snR13	YGR130C	P53278	816 aa		4.07	□□□□□ -1.76
snR13	snR13	ALO1	P54783	526 aa	Known RBP	4.07	□□□□□ -1.76
snR13	snR13	PEX13	P80667	386 aa		4.07	□□□□□ -1.76
snR13	snR13	ULP1	Q02724	621 aa		4.07	□□□□□ -1.76
snR13	snR13	TOS4	Q06266	489 aa		4.07	□□□□□ -1.76
snR13	snR13	YKR073C	P36153	106 aa		4.06	□□□□□ -1.76
snR13	snR13	OMA1	P36163	345 aa		4.06	□□□□□ -1.76
snR13	snR13	POL32	P47110	350 aa		4.06	□□□□□ -1.76
snR13	snR13	NOG1	Q02892	647 aa	Known RBP	4.06	□□□□□ -1.76
snR13	snR13	MED7	Q08278	222 aa		4.06	□□□□□ -1.76
snR13	snR13	TRP3	P00937	484 aa		4.05	□□□□□ -1.76
snR13	snR13	MSB1	P21339	1137 aa	Known RBP	4.05	□□□□□ -1.76
snR13	snR13	MSH3	P25336	1018 aa		4.05	□□□□□ -1.76
snR13	snR13	ARL1	P38116	183 aa	Known RBP	4.05	□□□□□ -1.76
snR13	snR13	TOS1	P38288	455 aa		4.05	□□□□□ -1.76
snR13	snR13	MGE1	P38523	228 aa		4.05	□□□□□ -1.76
snR13	snR13	MMM1	P41800	426 aa		4.05	□□□□□ -1.76
snR13	snR13	MTR4	P47047	1073 aa	Known RBP	4.05	□□□□□ -1.76
snR13	snR13	AVO1	Q08236	1176 aa		4.05	□□□□□ -1.76
snR13	snR13	LIP5	P32875	414 aa		4.04	□□□□□ -1.76
snR13	snR13	NEM1	P38757	446 aa		4.04	□□□□□ -1.76
snR13	snR13	SLS1	P42900	643 aa		4.04	□□□□□ -1.76
snR13	snR13	SPO74	P45819	413 aa		4.04	□□□□□ -1.76
snR13	snR13	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
snR13	snR13	ELA1	P53861	379 aa	Predicted RBP	4.04	□□□□□ -1.76
snR13	snR13	CYC7	P00045	113 aa		4.03	□□□□□ -1.76
snR13	snR13	HXK1	P04806	485 aa	Known RBP	4.03	□□□□□ -1.76
snR13	snR13	WHI3	P34761	661 aa	Known RBP	4.03	□□□□□ -1.76
snR13	snR13	ATG14	P38270	344 aa		4.03	□□□□□ -1.76
snR13	snR13	PEX28	P38848	579 aa		4.03	□□□□□ -1.76
snR13	snR13	MSH4	P40965	878 aa	Predicted RBP	4.03	□□□□□ -1.76
snR13	snR13	XKS1	P42826	600 aa		4.03	□□□□□ -1.76
snR13	snR13	CIT3	P43635	486 aa		4.03	□□□□□ -1.76
snR13	snR13	INP52	P50942	1183 aa		4.03	□□□□□ -1.76
snR13	snR13	YGR045C	P53229	120 aa		4.03	□□□□□ -1.76
snR13	snR13	YGR122W	P53272	402 aa		4.03	□□□□□ -1.76
snR13	snR13	YPL109C	Q02981	657 aa		4.03	□□□□□ -1.76
snR13	snR13	ADI1	Q03677	179 aa		4.03	□□□□□ -1.76
snR13	snR13	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
snR13	snR13	ATE1	P16639	503 aa		4.02	□□□□□ -1.77
snR13	snR13	VMA4	P22203	233 aa	Known RBP	4.02	□□□□□ -1.77
snR13	snR13	NFS1	P25374	497 aa		4.02	□□□□□ -1.77
snR13	snR13	HEM3	P28789	327 aa		4.02	□□□□□ -1.77
snR13	snR13	SMY2	P32909	740 aa	Known RBP	4.02	□□□□□ -1.77
snR13	snR13	ALT1	P52893	592 aa		4.02	□□□□□ -1.77
snR13	snR13	YOR059C	Q08448	450 aa	Known RBP	4.02	□□□□□ -1.77
snR13	snR13	NSI1	Q12457	570 aa		4.02	□□□□□ -1.77
snR13	snR13	RPS4A	P0CX35	261 aa	Known RBP	4.01	□□□□□ -1.77
snR13	snR13	RPS4B	P0CX36	261 aa	Known RBP	4.01	□□□□□ -1.77
snR13	snR13	ASF1	P32447	279 aa		4.01	□□□□□ -1.77
snR13	snR13	NNK1	P36003	928 aa		4.01	□□□□□ -1.77
snR13	snR13	YAR028W	P39548	234 aa		4.01	□□□□□ -1.77
snR13	snR13	RPS26A	P39938	119 aa	Known RBP	4.01	□□□□□ -1.77
snR13	snR13	RPS26B	P39939	119 aa	Known RBP	4.01	□□□□□ -1.77
snR13	snR13	UTP5	Q04177	643 aa	Known RBP	4.01	□□□□□ -1.77
snR13	snR13	MCD1	Q12158	566 aa		4.01	□□□□□ -1.77
snR13	snR13	RAD2	P07276	1031 aa		4	□□□□□ -1.77
snR13	snR13	SEC23	P15303	768 aa	Known RBP	4	□□□□□ -1.77
snR13	snR13	MCM2	P29469	868 aa		4	□□□□□ -1.77
snR13	snR13	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
snR13	snR13	MRPS18	P42847	217 aa		4	□□□□□ -1.77
snR13	snR13	YGL140C	P53120	1219 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms