RNA–Protein interactions for RNA: YOR116C

RPO31, Transcript of RNA polymerase III largest subunit C160, yeast

Gene RPO31, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO31	YOR116C	VMS1	Q04311	632 aa	Known RBP	4.21	□□□□□ -1.74
RPO31	YOR116C	BRE1	Q07457	700 aa	Known RBP	4.21	□□□□□ -1.74
RPO31	YOR116C	ZRT2	Q12436	422 aa		4.21	□□□□□ -1.74
RPO31	YOR116C	RPN12	P32496	274 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	BLI1	P35727	113 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	RKM3	P38222	552 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	CIR1	P42940	261 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	UTP5	Q04177	643 aa	Known RBP	4.2	□□□□□ -1.74
RPO31	YOR116C	SEC2	P17065	759 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	DID4	P36108	232 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	GLG2	P47011	380 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	ADY3	Q07732	790 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	RRI2	Q12348	645 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	SEC39	Q12745	709 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	TRK1	P12685	1235 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	PBY1	P38254	753 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	MET18	P40469	1032 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	RTC4	P53850	401 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RPO31	YOR116C	ATG20	Q07528	640 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	TLG2	Q08144	397 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	MED2	Q12124	431 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	PDR18	P53756	1333 aa		4.2	□□□□□ -1.74
RPO31	YOR116C	MSH1	P25846	959 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	YKT6	P36015	200 aa	Known RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	DPB3	P27344	201 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	RTG2	P32608	588 aa	Known RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	FZO1	P38297	855 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	SSF1	P38789	453 aa	Predicted RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	SHE4	P51534	789 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	VPS9	P54787	451 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	CRF1	Q04930	467 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	YLR287C	Q05881	355 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	SPO16	P17122	198 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	PRP4	P20053	465 aa	Known RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	PWP2	P25635	923 aa	Known RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	GCD7	P32502	381 aa	Predicted RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	VPS41	P38959	992 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	BDF2	Q07442	638 aa		4.19	□□□□□ -1.74
RPO31	YOR116C	SNU66	Q12420	587 aa	Predicted RBP	4.19	□□□□□ -1.74
RPO31	YOR116C	RPS19A	P07280	144 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	RPS19B	P07281	144 aa	Predicted RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	KIN3	P22209	435 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	YEL043W	P32618	956 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	YGR237C	P50089	785 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	YPR204W	Q08995	1032 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	IOC2	Q12072	812 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	TOM70	P07213	617 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	PIF1	P07271	859 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	MRPS28	P21771	286 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	BUD14	P27637	709 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	RPC19	P28000	142 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	ZIP1	P31111	875 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	SUB1	P54000	292 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	TIM50	Q02776	476 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	PDR1	P12383	1068 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	VPS3	P23643	1011 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	STO1	P34160	861 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	YEL1	P34225	687 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	DAS1	P47005	663 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	TEA1	P47988	759 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	MRS2	Q01926	470 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	YLH47	Q06493	454 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	PEX15	Q08215	383 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	SPC42	P36094	363 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	NMD3	P38861	518 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	BEM4	P39011	633 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	SEC9	P40357	651 aa		4.18	□□□□□ -1.74
RPO31	YOR116C	UTP14	Q04500	899 aa	Known RBP	4.18	□□□□□ -1.74
RPO31	YOR116C	GCD2	P12754	651 aa	Predicted RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	SSE2	P32590	693 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	CCT4	P39078	528 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	RVS167	P39743	482 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	YNL011C	P53980	444 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	THI22	Q06490	572 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	APC11	Q12157	165 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	SPC72	P39723	622 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	RLP7	P40693	322 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	YJL171C	P46992	396 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	CGR1	P53188	120 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	GTR1	Q00582	310 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	CIK1	Q01649	594 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	GFD1	Q04839	188 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	SMC5	Q08204	1093 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	CYB2	P00175	591 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	CDC60	P26637	1090 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	MET4	P32389	672 aa		4.17	□□□□□ -1.74
RPO31	YOR116C	GCD6	P32501	712 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	MRD1	Q06106	887 aa	Known RBP	4.17	□□□□□ -1.74
RPO31	YOR116C	UTP9	P38882	575 aa	Known RBP	4.16	□□□□□ -1.74
RPO31	YOR116C	INA22	P40576	216 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	MAD1	P40957	749 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	VPS20	Q04272	221 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	HXK1	P04806	485 aa	Known RBP	4.16	□□□□□ -1.74
RPO31	YOR116C	OM45	P16547	393 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	DIT2	P21595	489 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	RPS5	P26783	225 aa	Known RBP	4.16	□□□□□ -1.74
RPO31	YOR116C	SEC20	P28791	383 aa		4.16	□□□□□ -1.74
RPO31	YOR116C	YKL091C	P33324	310 aa	Known RBP	4.16	□□□□□ -1.74
RPO31	YOR116C	SAK1	P38990	1142 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms