RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C OPI1P21957 404 aa10.44□□□□□ -0.74
SPT20YOL148C PDB1P32473 366 aaKnown RBP10.44□□□□□ -0.74
SPT20YOL148C MIF2P35201 549 aa10.44□□□□□ -0.74
SPT20YOL148C YKR018CP36114 725 aa10.44□□□□□ -0.74
SPT20YOL148C OLA1P38219 394 aaKnown RBP10.44□□□□□ -0.74
SPT20YOL148C MRX1P40050 688 aa10.44□□□□□ -0.74
SPT20YOL148C EFM4P40516 257 aa10.44□□□□□ -0.74
SPT20YOL148C EPL1P43572 832 aa10.44□□□□□ -0.74
SPT20YOL148C RMP1Q12530 201 aa10.44□□□□□ -0.74
SPT20YOL148C TY4B-HP0C2J7 1802 aa10.44□□□□□ -0.74
SPT20YOL148C TY4B-JP47024 1803 aa10.44□□□□□ -0.74
SPT20YOL148C MTF2P10849 440 aa10.44□□□□□ -0.74
SPT20YOL148C RAD5P32849 1169 aaPredicted RBP10.44□□□□□ -0.74
SPT20YOL148C FAR11P53917 953 aa10.44□□□□□ -0.74
SPT20YOL148C NCS2P53923 493 aaPredicted RBP10.44□□□□□ -0.74
SPT20YOL148C CDC10P25342 322 aaKnown RBP10.43□□□□□ -0.74
SPT20YOL148C TPS3P38426 1054 aaKnown RBP10.43□□□□□ -0.74
SPT20YOL148C ATG3P40344 310 aa10.43□□□□□ -0.74
SPT20YOL148C EPS1P40557 701 aa10.43□□□□□ -0.74
SPT20YOL148C UTP5Q04177 643 aaKnown RBP10.43□□□□□ -0.74
SPT20YOL148C PUP2P32379 260 aa10.42□□□□□ -0.74
SPT20YOL148C CTM1P38818 585 aa10.42□□□□□ -0.74
SPT20YOL148C CUE3P53137 624 aaKnown RBP10.42□□□□□ -0.74
SPT20YOL148C RRP15Q06511 250 aaPredicted RBP10.42□□□□□ -0.74
SPT20YOL148C RRP6Q12149 733 aaKnown RBP10.42□□□□□ -0.74
SPT20YOL148C CDC37P06101 506 aaKnown RBP10.42□□□□□ -0.74
SPT20YOL148C KAR3P17119 729 aa10.42□□□□□ -0.74
SPT20YOL148C CBP3P21560 335 aa10.42□□□□□ -0.74
SPT20YOL148C ARG1P22768 420 aa10.42□□□□□ -0.74
SPT20YOL148C CDC11P32458 415 aa10.42□□□□□ -0.74
SPT20YOL148C SKI2P35207 1287 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
SPT20YOL148C ERV41Q04651 352 aa10.42□□□□□ -0.74
SPT20YOL148C ALE1Q08548 619 aa10.42□□□□□ -0.74
SPT20YOL148C SLA1P32790 1244 aa10.41□□□□□ -0.74
SPT20YOL148C YET1P35723 206 aa10.41□□□□□ -0.74
SPT20YOL148C SHQ1P40486 507 aaPredicted RBP10.41□□□□□ -0.74
SPT20YOL148C FKS3Q04952 1785 aa10.4□□□□□ -0.74
SPT20YOL148C PFK2P16862 959 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
SPT20YOL148C SHM1P37292 490 aaPredicted RBP10.4□□□□□ -0.74
SPT20YOL148C SEC5P89102 971 aa10.4□□□□□ -0.74
SPT20YOL148C YLR287CQ05881 355 aa10.4□□□□□ -0.74
SPT20YOL148C DCS2Q12123 353 aa10.4□□□□□ -0.74
SPT20YOL148C SSK22P25390 1331 aaPredicted RBP10.4□□□□□ -0.74
SPT20YOL148C SAC3P46674 1301 aa10.4□□□□□ -0.74
SPT20YOL148C MPH3P0CE00 602 aa10.4□□□□□ -0.75
SPT20YOL148C RPS6AP0CX37 236 aaKnown RBP10.4□□□□□ -0.75
SPT20YOL148C RPS6BP0CX38 236 aaPredicted RBP10.4□□□□□ -0.75
SPT20YOL148C CKI1P20485 582 aa10.4□□□□□ -0.75
SPT20YOL148C BUD14P27637 709 aa10.4□□□□□ -0.75
SPT20YOL148C NGL3Q03210 505 aa10.4□□□□□ -0.75
SPT20YOL148C UBX2Q04228 584 aa10.4□□□□□ -0.75
SPT20YOL148C SQT1P35184 431 aa10.39□□□□□ -0.75
SPT20YOL148C ENP2P48234 707 aaKnown RBP10.39□□□□□ -0.75
SPT20YOL148C SPO11P23179 398 aa10.38□□□□□ -0.75
SPT20YOL148C CLB4P24871 460 aa10.38□□□□□ -0.75
SPT20YOL148C RAD57P25301 460 aa10.38□□□□□ -0.75
SPT20YOL148C URA1P28272 314 aaPredicted RBP10.38□□□□□ -0.75
SPT20YOL148C PAP1P29468 568 aaKnown RBP10.38□□□□□ -0.75
SPT20YOL148C SEC8P32855 1065 aa10.38□□□□□ -0.75
SPT20YOL148C SET1P38827 1080 aaKnown RBP10.38□□□□□ -0.75
SPT20YOL148C YMR124WP39523 943 aaKnown RBP10.38□□□□□ -0.75
SPT20YOL148C MAD1P40957 749 aa10.38□□□□□ -0.75
SPT20YOL148C HCA4P20448 770 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C BMH1P29311 267 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C ADA2Q02336 434 aa10.37□□□□□ -0.75
SPT20YOL148C MEC3Q02574 474 aa10.37□□□□□ -0.75
SPT20YOL148C VPS64Q03944 604 aa10.37□□□□□ -0.75
SPT20YOL148C DPL1Q05567 589 aa10.37□□□□□ -0.75
SPT20YOL148C YVC1Q12324 675 aa10.37□□□□□ -0.75
SPT20YOL148C GYP5Q12344 894 aa10.37□□□□□ -0.75
SPT20YOL148C SPO12P17123 173 aa10.37□□□□□ -0.75
SPT20YOL148C RPN10P38886 268 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C HXT10P43581 546 aa10.37□□□□□ -0.75
SPT20YOL148C HUL5P53119 910 aa10.37□□□□□ -0.75
SPT20YOL148C ADE16P54113 591 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C CUS1Q02554 436 aaPredicted RBP10.37□□□□□ -0.75
SPT20YOL148C MRD1Q06106 887 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C NEW1Q08972 1196 aaKnown RBP10.37□□□□□ -0.75
SPT20YOL148C SSF2Q12153 453 aaPredicted RBP10.37□□□□□ -0.75
SPT20YOL148C GCD2P12754 651 aaPredicted RBP10.36□□□□□ -0.75
SPT20YOL148C LOS1P33418 1100 aaPredicted RBP10.36□□□□□ -0.75
SPT20YOL148C TFC3P34111 1160 aa10.36□□□□□ -0.75
SPT20YOL148C RPG1P38249 964 aaKnown RBP10.36□□□□□ -0.75
SPT20YOL148C ALD3P54114 506 aa10.36□□□□□ -0.75
SPT20YOL148C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75 RIP-Chip
SPT20YOL148C SUP35P05453 685 aaKnown RBP10.35□□□□□ -0.75
SPT20YOL148C YAP5P40574 245 aa10.35□□□□□ -0.75
SPT20YOL148C YGR237CP50089 785 aa10.35□□□□□ -0.75
SPT20YOL148C POB3Q04636 552 aaKnown RBP10.35□□□□□ -0.75
SPT20YOL148C ABP140Q08641 628 aaKnown RBP10.35□□□□□ -0.75
SPT20YOL148C LAS1P36146 502 aaPredicted RBP10.35□□□□□ -0.75
SPT20YOL148C SPP381P38282 291 aaPredicted RBP10.35□□□□□ -0.75
SPT20YOL148C TDA3P38758 523 aa10.35□□□□□ -0.75
SPT20YOL148C YIL001WP40560 513 aa10.35□□□□□ -0.75
SPT20YOL148C VPS53P47061 822 aa10.35□□□□□ -0.75
SPT20YOL148C TFB2Q02939 513 aa10.35□□□□□ -0.75
SPT20YOL148C VTI1Q04338 217 aa10.35□□□□□ -0.75
SPT20YOL148C MAK11P20484 414 aaKnown RBP10.34□□□□□ -0.75
SPT20YOL148C MIP6P38760 659 aaKnown RBP10.34□□□□□ -0.75
SPT20YOL148C GTR1Q00582 310 aa10.34□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms