RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	SUP35	P05453	685 aa	Known RBP	2.81	□□□□□ -1.96
TOP2	YNL088W	GAL2	P13181	574 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	RED1	P14291	827 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	PET123	P17558	318 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	MRPL25	P23369	157 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	VPS8	P39702	1274 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	TIF4631	P39935	952 aa	Known RBP	2.81	□□□□□ -1.96
TOP2	YNL088W	YER034W	P40022	185 aa	Known RBP	2.81	□□□□□ -1.96
TOP2	YNL088W	GPD2	P41911	440 aa	Known RBP	2.81	□□□□□ -1.96
TOP2	YNL088W	BBC1	P47068	1157 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	NAN1	Q02931	896 aa	Known RBP	2.81	□□□□□ -1.96
TOP2	YNL088W	PSR2	Q07949	397 aa		2.81	□□□□□ -1.96
TOP2	YNL088W	NUP145	P49687	1317 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	GAL1	P04385	528 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	FUR4	P05316	633 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	ERR1	P0CX10	437 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	ERR2	P0CX11	437 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	PHO84	P25297	587 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	MCM10	P32354	571 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	TRZ1	P36159	838 aa	Predicted RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	HAL5	P38970	855 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	YIL166C	P40445	542 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
TOP2	YNL088W	PEX14	P53112	341 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	YNR063W	P53749	607 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	YNL034W	P53963	612 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	YNL018C	P53976	612 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	PNG1	Q02890	363 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	PNP1	Q05788	311 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	ATG38	Q05789	226 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	YDR056C	Q12025	205 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	TRS33	Q99394	268 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	YMR084W	A2P2R3	262 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	KDX1	P36005	433 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	YTA6	P40328	754 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	HUL4	P40985	892 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	RAD17	P48581	401 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	SPO1	P53541	631 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	FPK1	P53739	893 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	NCS2	P53923	493 aa	Predicted RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	REX2	P54964	269 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	DBP9	Q06218	594 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	NEW1	Q08972	1196 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	HMI1	Q12039	706 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	APC2	Q12440	853 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	MCM3	P24279	971 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	SPT5	P27692	1063 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
TOP2	YNL088W	YHR020W	P38708	688 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	RPS26A	P39938	119 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	RPS26B	P39939	119 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	GCD10	P41814	478 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	CCM1	P48237	864 aa	Predicted RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	ALF1	P53904	254 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	MET14	Q02196	202 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	TDA5	Q06417	326 aa	Known RBP	2.8	□□□□□ -1.96
TOP2	YNL088W	NTG2	Q08214	380 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	APC11	Q12157	165 aa		2.8	□□□□□ -1.96
TOP2	YNL088W	KAR2	P16474	682 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	PRI2	P20457	528 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	DAL80	P26343	269 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	MIF2	P35201	549 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	MNR2	P35724	969 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	ARB1	P40024	610 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	RTT105	P40063	208 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SUM1	P46676	1062 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SGM1	P47166	707 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	PTA1	Q01329	785 aa	Predicted RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	SGD1	Q06132	899 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SMD2	Q06217	110 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	FLC1	Q08967	793 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SES1	P07284	462 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	TRX1	P22217	103 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	ROG3	P43602	733 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	PMT3	P47190	753 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	COG6	P53959	839 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	RSC58	Q07979	502 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SSP2	Q08646	371 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	PRT1	P06103	763 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	YKR023W	P36119	530 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	RIM4	P38741	713 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	YMR124W	P39523	943 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	RSP5	P39940	809 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	TYW3	P53177	273 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	RRB1	Q04225	511 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	GAD1	Q04792	585 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	AOS1	Q06624	347 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	FUR1	P18562	216 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	DIT1	P21623	536 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	SRO9	P25567	434 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	PTP2	P29461	750 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	IMP2'	P32351	346 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	YKL133C	P36066	463 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	CCL1	P37366	393 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	FMP10	P40098	244 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	JEM1	P40358	645 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	RAT1	Q02792	1006 aa	Known RBP	2.79	□□□□□ -1.96
TOP2	YNL088W	SNZ1	Q03148	297 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	YDR090C	Q03193	310 aa		2.79	□□□□□ -1.96
TOP2	YNL088W	YDL073W	Q07454	984 aa		2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms