RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	LSB6	P42951	607 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	NCE103	P53615	221 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	GDE1	Q02979	1223 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	SPF1	P39986	1215 aa	Known RBP	3.58	□□□□□ -1.84
LEU3	YLR451W	RPN4	Q03465	531 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	NSE3	Q05541	303 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	PMT7	Q06644	662 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	OPI10	Q08202	246 aa		3.58	□□□□□ -1.84
LEU3	YLR451W	RER2	P35196	286 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	YJL181W	P46987	611 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	KRE33	P53914	1056 aa	Known RBP	3.57	□□□□□ -1.84
LEU3	YLR451W	HEH2	Q03281	663 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	HAS1	Q03532	505 aa	Known RBP	3.57	□□□□□ -1.84
LEU3	YLR451W	YDR444W	Q04093	687 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	YPL066W	Q12194	479 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	NEM1	P38757	446 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	MAD1	P40957	749 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	RTT10	Q08924	1013 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	CLN2	P20438	545 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	PRI2	P20457	528 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	AFG2	P32794	780 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	PFD1	P46988	109 aa		3.57	□□□□□ -1.84
LEU3	YLR451W	NAR1	P23503	491 aa	Known RBP	3.56	□□□□□ -1.84
LEU3	YLR451W	SPC42	P36094	363 aa		3.56	□□□□□ -1.84
LEU3	YLR451W	SIW14	P53965	281 aa		3.56	□□□□□ -1.84
LEU3	YLR451W	ADE12	P80210	433 aa	Known RBP	3.56	□□□□□ -1.84
LEU3	YLR451W	TRP2	P00899	507 aa	Known RBP	3.56	□□□□□ -1.84
LEU3	YLR451W	SLS1	P42900	643 aa		3.56	□□□□□ -1.84
LEU3	YLR451W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
LEU3	YLR451W	YIG1	Q08956	461 aa		3.56	□□□□□ -1.84
LEU3	YLR451W	KAR2	P16474	682 aa	Known RBP	3.55	□□□□□ -1.84
LEU3	YLR451W	PEX13	P80667	386 aa		3.55	□□□□□ -1.84
LEU3	YLR451W	ROD1	Q02805	837 aa		3.55	□□□□□ -1.84
LEU3	YLR451W	MKK2	P32491	506 aa		3.55	□□□□□ -1.84
LEU3	YLR451W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
LEU3	YLR451W	POL5	P39985	1022 aa	Known RBP	3.55	□□□□□ -1.84
LEU3	YLR451W	HUL5	P53119	910 aa		3.55	□□□□□ -1.84
LEU3	YLR451W	RAT1	Q02792	1006 aa	Known RBP	3.55	□□□□□ -1.84
LEU3	YLR451W	UTP5	Q04177	643 aa	Known RBP	3.55	□□□□□ -1.84
LEU3	YLR451W	MRL1	Q06815	381 aa		3.55	□□□□□ -1.84
LEU3	YLR451W	PDC5	P16467	563 aa	Known RBP	3.54	□□□□□ -1.84
LEU3	YLR451W	FPS1	P23900	669 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	DOS2	P54858	310 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	YMR265C	Q03508	461 aa	Known RBP	3.54	□□□□□ -1.84
LEU3	YLR451W	IOC4	Q04213	475 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	YLR346C	Q06139	101 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	GPM1	P00950	247 aa	Known RBP	3.54	□□□□□ -1.84
LEU3	YLR451W	YBR287W	P38355	427 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	CAF120	P53836	1060 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	GIS4	Q04233	774 aa		3.54	□□□□□ -1.84
LEU3	YLR451W	NAP1	P25293	417 aa	Known RBP	3.53	□□□□□ -1.84
LEU3	YLR451W	RNH70	P53331	553 aa		3.53	□□□□□ -1.84
LEU3	YLR451W	TIF35	Q04067	274 aa	Known RBP	3.53	□□□□□ -1.84
LEU3	YLR451W	VMA4	P22203	233 aa	Known RBP	3.53	□□□□□ -1.84
LEU3	YLR451W	ABD1	P32783	436 aa	Predicted RBP	3.53	□□□□□ -1.84
LEU3	YLR451W	RSM26	P47141	266 aa		3.53	□□□□□ -1.84
LEU3	YLR451W	TYW3	P53177	273 aa		3.53	□□□□□ -1.84
LEU3	YLR451W	FPR4	Q06205	392 aa	Predicted RBP	3.53	□□□□□ -1.84
LEU3	YLR451W	KNS1	P32350	737 aa	Predicted RBP	3.52	□□□□□ -1.85
LEU3	YLR451W	YJL049W	P47048	450 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	JJJ3	P47138	172 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	RSC2	Q06488	889 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	RAD4	P14736	754 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	ERS1	P17261	260 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	PAN5	P38787	379 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	SIP5	P40210	489 aa	Known RBP	3.52	□□□□□ -1.85
LEU3	YLR451W	MPH1	P40562	993 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	FET4	P40988	552 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	GUP1	P53154	560 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	GCR2	Q01722	534 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	SPO71	Q03868	1245 aa		3.52	□□□□□ -1.85
LEU3	YLR451W	YLR225C	Q05948	407 aa	Known RBP	3.52	□□□□□ -1.85
LEU3	YLR451W	TAF13	P11747	167 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	YBR184W	P38299	523 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	SOK2	P53438	785 aa	Predicted RBP	3.51	□□□□□ -1.85
LEU3	YLR451W	WRS1	Q12109	432 aa	Known RBP	3.51	□□□□□ -1.85
LEU3	YLR451W	TY4B-P	A0A0B7P3V8	1104 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	AGP1	P25376	633 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	VBA5	P36172	582 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	GIP2	P40036	548 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	MAL11	P53048	616 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	ALG12	P53730	551 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	TY4A-H	Q6Q5P6	413 aa		3.51	□□□□□ -1.85
LEU3	YLR451W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
LEU3	YLR451W	BAS1	P22035	811 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	ECM2	P38241	364 aa	Known RBP	3.5	□□□□□ -1.85
LEU3	YLR451W	UTP22	P53254	1237 aa	Predicted RBP	3.5	□□□□□ -1.85
LEU3	YLR451W	SHE9	Q04172	456 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	TDA5	Q06417	326 aa	Known RBP	3.5	□□□□□ -1.85
LEU3	YLR451W	RPL8B	P29453	256 aa	Known RBP	3.5	□□□□□ -1.85
LEU3	YLR451W	LYP1	P32487	611 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	TIM23	P32897	222 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	MOT2	P34909	587 aa	Known RBP	3.5	□□□□□ -1.85
LEU3	YLR451W	SQT1	P35184	431 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	TED1	P40533	473 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	SPO74	P45819	413 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	ENT3	P47160	408 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	CWC24	P53769	259 aa		3.5	□□□□□ -1.85
LEU3	YLR451W	RPP1A	P05318	106 aa	Predicted RBP	3.49	□□□□□ -1.85
LEU3	YLR451W	ERR1	P0CX10	437 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms