RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C REC8Q12188 680 aa6.41□□□□□ -1.38
SMD3YLR147C HXK1P04806 485 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C TY1A-LR4P0C2I8 440 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C TY1A-DR6P0CX70 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-ER1P0CX71 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-LR2P0CX72 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-PLP0CX73 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-JR1P0CX74 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-LR3P0CX75 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-ML2P0CX76 440 aa6.4□□□□□ -1.38
SMD3YLR147C PGM1P33401 570 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C FAA3P39002 694 aa6.4□□□□□ -1.38
SMD3YLR147C GCV1P48015 400 aa6.4□□□□□ -1.38
SMD3YLR147C KIP3P53086 805 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C UTP22P53254 1237 aaPredicted RBP6.4□□□□□ -1.38
SMD3YLR147C FAR11P53917 953 aa6.4□□□□□ -1.38
SMD3YLR147C ULP1Q02724 621 aa6.4□□□□□ -1.38
SMD3YLR147C NOG1Q02892 647 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C TY1A-GR1Q12085 440 aa6.4□□□□□ -1.38
SMD3YLR147C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C TY1A-OLQ92392 440 aaKnown RBP6.4□□□□□ -1.38
SMD3YLR147C EXO5P38289 585 aa6.39□□□□□ -1.39
SMD3YLR147C YJR107WP47145 328 aa6.39□□□□□ -1.39
SMD3YLR147C MEC3Q02574 474 aa6.39□□□□□ -1.39
SMD3YLR147C KAR2P16474 682 aaKnown RBP6.38□□□□□ -1.39
SMD3YLR147C YPL109CQ02981 657 aa6.38□□□□□ -1.39
SMD3YLR147C YMR074CQ04773 145 aa6.37□□□□□ -1.39
SMD3YLR147C MCM2P29469 868 aa6.36□□□□□ -1.39
SMD3YLR147C NAM7P30771 971 aaKnown RBP6.36□□□□□ -1.39
SMD3YLR147C MGE1P38523 228 aa6.36□□□□□ -1.39
SMD3YLR147C ADI1Q03677 179 aa6.36□□□□□ -1.39
SMD3YLR147C YKL077WP36081 392 aa6.35□□□□□ -1.39
SMD3YLR147C REI1P38344 393 aaPredicted RBP6.35□□□□□ -1.39
SMD3YLR147C NEM1P38757 446 aa6.35□□□□□ -1.39
SMD3YLR147C SLS1P42900 643 aa6.35□□□□□ -1.39
SMD3YLR147C YGR122WP53272 402 aa6.35□□□□□ -1.39
SMD3YLR147C YOR223WQ12015 292 aa6.35□□□□□ -1.39
SMD3YLR147C YLL054CQ12244 843 aa6.35□□□□□ -1.39
SMD3YLR147C MSH3P25336 1018 aa6.34□□□□□ -1.39
SMD3YLR147C ARL1P38116 183 aaKnown RBP6.34□□□□□ -1.39
SMD3YLR147C PEX28P38848 579 aa6.34□□□□□ -1.39
SMD3YLR147C SHU2P38957 223 aa6.34□□□□□ -1.39
SMD3YLR147C PIC2P40035 300 aa6.34□□□□□ -1.39
SMD3YLR147C FYV10P40492 516 aa6.34□□□□□ -1.39
SMD3YLR147C SEC8P32855 1065 aa6.33□□□□□ -1.4
SMD3YLR147C RPS26AP39938 119 aaKnown RBP6.33□□□□□ -1.4
SMD3YLR147C RPS26BP39939 119 aaKnown RBP6.33□□□□□ -1.4
SMD3YLR147C PEX13P80667 386 aa6.33□□□□□ -1.4
SMD3YLR147C DOT1Q04089 582 aaKnown RBP6.33□□□□□ -1.4
SMD3YLR147C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SMD3YLR147C ALG6Q12001 544 aaKnown RBP6.33□□□□□ -1.4
SMD3YLR147C HEM13P11353 328 aaKnown RBP6.32□□□□□ -1.4
SMD3YLR147C CYC8P14922 966 aa6.32□□□□□ -1.4
SMD3YLR147C ASF1P32447 279 aa6.32□□□□□ -1.4
SMD3YLR147C GPT2P36148 743 aa6.32□□□□□ -1.4
SMD3YLR147C AKR1P39010 764 aa6.32□□□□□ -1.4
SMD3YLR147C RSM26P47141 266 aa6.32□□□□□ -1.4
SMD3YLR147C YGL140CP53120 1219 aa6.32□□□□□ -1.4
SMD3YLR147C SPR28Q04921 423 aa6.32□□□□□ -1.4
SMD3YLR147C YLR122CQ12312 125 aa6.32□□□□□ -1.4
SMD3YLR147C RAD2P07276 1031 aa6.31□□□□□ -1.4
SMD3YLR147C COQ2P32378 372 aa6.31□□□□□ -1.4
SMD3YLR147C SQT1P35184 431 aa6.31□□□□□ -1.4
SMD3YLR147C RDH54P38086 958 aa6.31□□□□□ -1.4
SMD3YLR147C SAF1P38352 637 aa6.31□□□□□ -1.4
SMD3YLR147C YGR045CP53229 120 aa6.31□□□□□ -1.4
SMD3YLR147C UTP5Q04177 643 aaKnown RBP6.31□□□□□ -1.4
SMD3YLR147C GIC2Q06648 383 aa6.31□□□□□ -1.4
SMD3YLR147C PRE9P23638 258 aaKnown RBP6.3□□□□□ -1.4
SMD3YLR147C MRPS18P42847 217 aa6.3□□□□□ -1.4
SMD3YLR147C MCD1Q12158 566 aa6.3□□□□□ -1.4
SMD3YLR147C OYE2Q03558 400 aaKnown RBP6.29□□□□□ -1.4
SMD3YLR147C SEC23P15303 768 aaKnown RBP6.28□□□□□ -1.4
SMD3YLR147C VMA4P22203 233 aaKnown RBP6.28□□□□□ -1.4
SMD3YLR147C KAE1P36132 386 aa6.28□□□□□ -1.4
SMD3YLR147C SPO74P45819 413 aa6.28□□□□□ -1.4
SMD3YLR147C MTR4P47047 1073 aaKnown RBP6.28□□□□□ -1.4
SMD3YLR147C ELA1P53861 379 aaPredicted RBP6.28□□□□□ -1.4
SMD3YLR147C MSH4P40965 878 aaPredicted RBP6.27□□□□□ -1.41
SMD3YLR147C TRP3P00937 484 aa6.26□□□□□ -1.41
SMD3YLR147C CHS2P14180 963 aa6.26□□□□□ -1.41
SMD3YLR147C XKS1P42826 600 aa6.26□□□□□ -1.41
SMD3YLR147C AVO1Q08236 1176 aa6.26□□□□□ -1.41
SMD3YLR147C SBP1P10080 294 aaKnown RBP6.25□□□□□ -1.41
SMD3YLR147C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SMD3YLR147C RPS4AP0CX35 261 aaKnown RBP6.24□□□□□ -1.41
SMD3YLR147C RPS4BP0CX36 261 aaKnown RBP6.24□□□□□ -1.41
SMD3YLR147C MSB1P21339 1137 aaKnown RBP6.24□□□□□ -1.41
SMD3YLR147C YAR028WP39548 234 aa6.24□□□□□ -1.41
SMD3YLR147C ALT1P52893 592 aa6.24□□□□□ -1.41
SMD3YLR147C YGR130CP53278 816 aa6.24□□□□□ -1.41
SMD3YLR147C ALO1P54783 526 aaKnown RBP6.24□□□□□ -1.41
SMD3YLR147C EAR1Q03212 550 aa6.24□□□□□ -1.41
SMD3YLR147C WHI3P34761 661 aaKnown RBP6.23□□□□□ -1.41
SMD3YLR147C ADD66P36040 267 aa6.23□□□□□ -1.41
SMD3YLR147C YKR073CP36153 106 aa6.23□□□□□ -1.41
SMD3YLR147C GNP1P48813 663 aa6.23□□□□□ -1.41
SMD3YLR147C RMD1Q03441 430 aa6.23□□□□□ -1.41
SMD3YLR147C ESF1Q06344 628 aaKnown RBP6.23□□□□□ -1.41
SMD3YLR147C GLT1Q12680 2145 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms