RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W TY1A-DR5P0CX65 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-ER2P0CX66 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-GR3P0CX67 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-LR1P0CX68 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-MR2P0CX69 440 aa3.1□□□□□ -1.91
SDC25YLL016W CDC34P14682 295 aa3.1□□□□□ -1.91
SDC25YLL016W FUI1P38196 639 aa3.1□□□□□ -1.91
SDC25YLL016W SPF1P39986 1215 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W DAS1P47005 663 aa3.1□□□□□ -1.91
SDC25YLL016W TY4A-JP47023 414 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-JR2P47099 440 aa3.1□□□□□ -1.91
SDC25YLL016W ITC1P53125 1264 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-DR1Q03856 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-ML1Q04706 440 aaKnown RBP3.1□□□□□ -1.91
SDC25YLL016W PPM2Q08282 695 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-BRQ12217 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-NL2Q12470 440 aa3.1□□□□□ -1.91
SDC25YLL016W TY1A-GR2Q12485 440 aa3.1□□□□□ -1.91
SDC25YLL016W HXK1P04806 485 aaKnown RBP3.09□□□□□ -1.91
SDC25YLL016W DAT1P13483 248 aaKnown RBP3.09□□□□□ -1.91
SDC25YLL016W MRC1P25588 1096 aa3.09□□□□□ -1.91
SDC25YLL016W DPB3P27344 201 aa3.09□□□□□ -1.91
SDC25YLL016W SMC1P32908 1225 aa3.09□□□□□ -1.91
SDC25YLL016W YKL069WP36088 180 aa3.09□□□□□ -1.91
SDC25YLL016W TBS1P38114 1094 aa3.09□□□□□ -1.91
SDC25YLL016W PAC1P39946 494 aaKnown RBP3.09□□□□□ -1.91
SDC25YLL016W YJR115WP47152 169 aa3.09□□□□□ -1.91
SDC25YLL016W HLJ1P48353 224 aa3.09□□□□□ -1.91
SDC25YLL016W TOS4Q06266 489 aa3.09□□□□□ -1.91
SDC25YLL016W APC11Q12157 165 aa3.09□□□□□ -1.91
SDC25YLL016W NUP145P49687 1317 aa3.09□□□□□ -1.91
SDC25YLL016W CCP1P00431 361 aa3.09□□□□□ -1.92
SDC25YLL016W THS1P04801 734 aaKnown RBP3.09□□□□□ -1.92
SDC25YLL016W YEF3P16521 1044 aaKnown RBP3.09□□□□□ -1.92
SDC25YLL016W PAT1P25644 796 aaKnown RBP3.09□□□□□ -1.92
SDC25YLL016W UTR2P32623 467 aa3.09□□□□□ -1.92
SDC25YLL016W TAT2P38967 592 aa3.09□□□□□ -1.92
SDC25YLL016W RSP5P39940 809 aaKnown RBP3.09□□□□□ -1.92
SDC25YLL016W INP54Q08227 384 aaKnown RBP3.09□□□□□ -1.92
SDC25YLL016W VAC17P25591 423 aa3.08□□□□□ -1.92
SDC25YLL016W NOC2P39744 710 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W RRN7P40992 514 aa3.08□□□□□ -1.92
SDC25YLL016W YNR029CP53729 429 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W SPO20Q04359 397 aa3.08□□□□□ -1.92
SDC25YLL016W PWP2P25635 923 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W NIT1P40447 199 aa3.08□□□□□ -1.92
SDC25YLL016W HXT10P43581 546 aa3.08□□□□□ -1.92
SDC25YLL016W ELP4Q02884 456 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W ENT2Q05785 613 aa3.08□□□□□ -1.92
SDC25YLL016W EDE1P34216 1381 aa3.08□□□□□ -1.92
SDC25YLL016W HSP60P19882 572 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W VMA4P22203 233 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W VPS24P36095 224 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W YHR020WP38708 688 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W GGA2P38817 585 aaKnown RBP3.08□□□□□ -1.92
SDC25YLL016W BOI2P39969 1040 aa3.08□□□□□ -1.92
SDC25YLL016W FIR1P40020 876 aa3.08□□□□□ -1.92
SDC25YLL016W PDR11P40550 1411 aa3.07□□□□□ -1.92
SDC25YLL016W KAR2P16474 682 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W MRPL33P20084 86 aa3.07□□□□□ -1.92
SDC25YLL016W ARE1P25628 610 aa3.07□□□□□ -1.92
SDC25YLL016W PRP40P33203 583 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W MPE1P35728 441 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W ECM2P38241 364 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W YBR184WP38299 523 aa3.07□□□□□ -1.92
SDC25YLL016W RAD55P38953 406 aa3.07□□□□□ -1.92
SDC25YLL016W HXT8P40886 569 aa3.07□□□□□ -1.92
SDC25YLL016W HUL4P40985 892 aa3.07□□□□□ -1.92
SDC25YLL016W ARH1P48360 493 aa3.07□□□□□ -1.92
SDC25YLL016W YGR237CP50089 785 aa3.07□□□□□ -1.92
SDC25YLL016W MRL1Q06815 381 aa3.07□□□□□ -1.92
SDC25YLL016W NCR1Q12200 1170 aa3.07□□□□□ -1.92
SDC25YLL016W RRD1P40454 393 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W ALO1P54783 526 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W COG4Q06096 861 aa3.07□□□□□ -1.92
SDC25YLL016W YCS4Q06156 1176 aa3.07□□□□□ -1.92
SDC25YLL016W BRE1Q07457 700 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W NTG2Q08214 380 aa3.07□□□□□ -1.92
SDC25YLL016W SLX4Q12098 748 aa3.07□□□□□ -1.92
SDC25YLL016W TMA17Q12513 150 aa3.07□□□□□ -1.92
SDC25YLL016W TMA7Q3E764 64 aaKnown RBP3.07□□□□□ -1.92
SDC25YLL016W CAN1P04817 590 aa3.06□□□□□ -1.92
SDC25YLL016W PEX8P53248 589 aa3.06□□□□□ -1.92
SDC25YLL016W APP1P53933 587 aa3.06□□□□□ -1.92
SDC25YLL016W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
SDC25YLL016W ATG16Q03818 150 aa3.06□□□□□ -1.92
SDC25YLL016W EAF1Q06337 982 aa3.06□□□□□ -1.92
SDC25YLL016W RTT10Q08924 1013 aa3.06□□□□□ -1.92
SDC25YLL016W RPL8AP17076 256 aaKnown RBP3.06□□□□□ -1.92
SDC25YLL016W RPN12P32496 274 aa3.06□□□□□ -1.92
SDC25YLL016W GEM1P39722 662 aa3.06□□□□□ -1.92
SDC25YLL016W TFB2Q02939 513 aa3.06□□□□□ -1.92
SDC25YLL016W NKP1Q12493 238 aa3.06□□□□□ -1.92
SDC25YLL016W MCM5P29496 775 aaKnown RBP3.06□□□□□ -1.92
SDC25YLL016W LDH1P38139 375 aa3.06□□□□□ -1.92
SDC25YLL016W YGR053CP53234 283 aa3.06□□□□□ -1.92
SDC25YLL016W MTC5Q03897 1148 aa3.06□□□□□ -1.92
SDC25YLL016W SND1Q04007 877 aa3.06□□□□□ -1.92
SDC25YLL016W ATG13Q06628 738 aa3.06□□□□□ -1.92
SDC25YLL016W YDL129WQ07555 291 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms