RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YPL034WQ03083 165 aa3.26□□□□□ -1.89
SNU114YKL173W IOC3P43596 787 aa3.26□□□□□ -1.89
SNU114YKL173W SVF1Q05515 481 aa3.26□□□□□ -1.89
SNU114YKL173W HEM13P11353 328 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W VPS35P34110 944 aa3.25□□□□□ -1.89
SNU114YKL173W BRN1P38170 754 aa3.25□□□□□ -1.89
SNU114YKL173W GCV1P48015 400 aa3.25□□□□□ -1.89
SNU114YKL173W SPR28Q04921 423 aa3.25□□□□□ -1.89
SNU114YKL173W REC8Q12188 680 aa3.25□□□□□ -1.89
SNU114YKL173W EXO5P38289 585 aa3.25□□□□□ -1.89
SNU114YKL173W RVS167P39743 482 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W FET4P40988 552 aa3.25□□□□□ -1.89
SNU114YKL173W SAM37P50110 327 aa3.25□□□□□ -1.89
SNU114YKL173W ELG1Q12050 791 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR4P0C2I8 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-DR6P0CX70 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-ER1P0CX71 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR2P0CX72 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-PLP0CX73 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-JR1P0CX74 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-LR3P0CX75 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-ML2P0CX76 440 aa3.25□□□□□ -1.89
SNU114YKL173W RDH54P38086 958 aa3.25□□□□□ -1.89
SNU114YKL173W YCS4Q06156 1176 aa3.25□□□□□ -1.89
SNU114YKL173W NOC3Q07896 663 aaPredicted RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-GR1Q12085 440 aa3.25□□□□□ -1.89
SNU114YKL173W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W TY1A-OLQ92392 440 aaKnown RBP3.25□□□□□ -1.89
SNU114YKL173W HXK1P04806 485 aaKnown RBP3.24□□□□□ -1.89
SNU114YKL173W TAT2P38967 592 aa3.24□□□□□ -1.89
SNU114YKL173W PMT7Q06644 662 aa3.24□□□□□ -1.89
SNU114YKL173W UGA4P32837 571 aa3.24□□□□□ -1.89
SNU114YKL173W TAT1P38085 619 aa3.24□□□□□ -1.89
SNU114YKL173W JIP5Q06214 492 aaPredicted RBP3.24□□□□□ -1.89
SNU114YKL173W YOL098CQ12496 1037 aa3.23□□□□□ -1.89
SNU114YKL173W MAE1P36013 669 aaKnown RBP3.23□□□□□ -1.89
SNU114YKL173W ARL1P38116 183 aaKnown RBP3.23□□□□□ -1.89
SNU114YKL173W YHL008CP38750 627 aa3.23□□□□□ -1.89
SNU114YKL173W THI12P42883 340 aa3.23□□□□□ -1.89
SNU114YKL173W THI5P43534 340 aa3.23□□□□□ -1.89
SNU114YKL173W THI11P47183 340 aa3.23□□□□□ -1.89
SNU114YKL173W INP52P50942 1183 aa3.23□□□□□ -1.89
SNU114YKL173W MEC3Q02574 474 aa3.23□□□□□ -1.89
SNU114YKL173W THI13Q07748 340 aa3.23□□□□□ -1.89
SNU114YKL173W GCD6P32501 712 aaKnown RBP3.22□□□□□ -1.89
SNU114YKL173W NNF1P47149 201 aa3.22□□□□□ -1.89
SNU114YKL173W SSF2Q12153 453 aaPredicted RBP3.22□□□□□ -1.89
SNU114YKL173W YLR122CQ12312 125 aa3.22□□□□□ -1.89
SNU114YKL173W MCM2P29469 868 aa3.22□□□□□ -1.89
SNU114YKL173W VAC8P39968 578 aa3.22□□□□□ -1.89
SNU114YKL173W BUD6P41697 788 aa3.22□□□□□ -1.89
SNU114YKL173W RNH70P53331 553 aa3.22□□□□□ -1.89
SNU114YKL173W YPL109CQ02981 657 aa3.22□□□□□ -1.89
SNU114YKL173W VPS16Q03308 798 aa3.22□□□□□ -1.89
SNU114YKL173W FPR4Q06205 392 aaPredicted RBP3.22□□□□□ -1.89
SNU114YKL173W CIT2P08679 460 aa3.22□□□□□ -1.89
SNU114YKL173W RSC6P25632 483 aa3.22□□□□□ -1.89
SNU114YKL173W PRP40P33203 583 aaKnown RBP3.22□□□□□ -1.89
SNU114YKL173W SAF1P38352 637 aa3.22□□□□□ -1.89
SNU114YKL173W NEO1P40527 1151 aa3.22□□□□□ -1.89
SNU114YKL173W THO2P53552 1597 aaKnown RBP3.21□□□□□ -1.89
SNU114YKL173W CIC1P38779 376 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W FAA3P39002 694 aa3.21□□□□□ -1.9
SNU114YKL173W KIP3P53086 805 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W UTP22P53254 1237 aaPredicted RBP3.21□□□□□ -1.9
SNU114YKL173W ALD6P54115 500 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W ULP1Q02724 621 aa3.21□□□□□ -1.9
SNU114YKL173W PIN2Q12057 282 aa3.21□□□□□ -1.9
SNU114YKL173W RPT1P33299 467 aaKnown RBP3.21□□□□□ -1.9
SNU114YKL173W PIC2P40035 300 aa3.21□□□□□ -1.9
SNU114YKL173W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
SNU114YKL173W NMD2P38798 1089 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W GNP1P48813 663 aa3.2□□□□□ -1.9
SNU114YKL173W TCB3Q03640 1545 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W NAM7P30771 971 aaKnown RBP3.2□□□□□ -1.9
SNU114YKL173W NEM1P38757 446 aa3.2□□□□□ -1.9
SNU114YKL173W YGR122WP53272 402 aa3.2□□□□□ -1.9
SNU114YKL173W TRP3P00937 484 aa3.19□□□□□ -1.9
SNU114YKL173W SEC23P15303 768 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W MCM5P29496 775 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W YKR073CP36153 106 aa3.19□□□□□ -1.9
SNU114YKL173W MGE1P38523 228 aa3.19□□□□□ -1.9
SNU114YKL173W ALT1P52893 592 aa3.19□□□□□ -1.9
SNU114YKL173W MON1P53129 644 aa3.19□□□□□ -1.9
SNU114YKL173W ADI1Q03677 179 aa3.19□□□□□ -1.9
SNU114YKL173W YOR223WQ12015 292 aa3.19□□□□□ -1.9
SNU114YKL173W VMA4P22203 233 aaKnown RBP3.19□□□□□ -1.9
SNU114YKL173W CTH1P47976 325 aa3.19□□□□□ -1.9
SNU114YKL173W YGL140CP53120 1219 aa3.19□□□□□ -1.9
SNU114YKL173W INO80P53115 1489 aa3.19□□□□□ -1.9
SNU114YKL173W MSH3P25336 1018 aa3.19□□□□□ -1.9
SNU114YKL173W SEA4P38164 1038 aa3.19□□□□□ -1.9
SNU114YKL173W RPN4Q03465 531 aa3.19□□□□□ -1.9
SNU114YKL173W CYC8P14922 966 aa3.18□□□□□ -1.9
SNU114YKL173W HXT13P39924 564 aa3.18□□□□□ -1.9
SNU114YKL173W SLS1P42900 643 aa3.18□□□□□ -1.9
SNU114YKL173W HXT17P53631 564 aa3.18□□□□□ -1.9
SNU114YKL173W HXT15P54854 567 aa3.18□□□□□ -1.9
SNU114YKL173W UTP5Q04177 643 aaKnown RBP3.18□□□□□ -1.9
SNU114YKL173W DAL4Q04895 635 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms