RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YGR122WP53272 402 aa6.83□□□□□ -1.32
PTM1YKL039W YPL109CQ02981 657 aa6.83□□□□□ -1.32
PTM1YKL039W TY1A-LR4P0C2I8 440 aaKnown RBP6.82□□□□□ -1.32
PTM1YKL039W TY1A-DR6P0CX70 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-ER1P0CX71 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-LR2P0CX72 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-PLP0CX73 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-JR1P0CX74 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-LR3P0CX75 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-ML2P0CX76 440 aa6.82□□□□□ -1.32
PTM1YKL039W RGA2Q06407 1009 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-GR1Q12085 440 aa6.82□□□□□ -1.32
PTM1YKL039W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.82□□□□□ -1.32
PTM1YKL039W TY1A-OLQ92392 440 aaKnown RBP6.82□□□□□ -1.32
PTM1YKL039W MAE1P36013 669 aaKnown RBP6.82□□□□□ -1.32
PTM1YKL039W SEC8P32855 1065 aa6.81□□□□□ -1.32
PTM1YKL039W EXO5P38289 585 aa6.81□□□□□ -1.32
PTM1YKL039W GCV1P48015 400 aa6.81□□□□□ -1.32
PTM1YKL039W UTP22P53254 1237 aaPredicted RBP6.81□□□□□ -1.32
PTM1YKL039W SPR28Q04921 423 aa6.81□□□□□ -1.32
PTM1YKL039W RPS26AP39938 119 aaKnown RBP6.8□□□□□ -1.32
PTM1YKL039W RPS26BP39939 119 aaKnown RBP6.8□□□□□ -1.32
PTM1YKL039W NOG1Q02892 647 aaKnown RBP6.8□□□□□ -1.32
PTM1YKL039W ADI1Q03677 179 aa6.8□□□□□ -1.32
PTM1YKL039W CYC8P14922 966 aa6.79□□□□□ -1.32
PTM1YKL039W TAT1P38085 619 aa6.79□□□□□ -1.32
PTM1YKL039W OYE2Q03558 400 aaKnown RBP6.79□□□□□ -1.32
PTM1YKL039W MCA1Q08601 432 aa6.79□□□□□ -1.32
PTM1YKL039W SHU2P38957 223 aa6.78□□□□□ -1.32
PTM1YKL039W CCT8P47079 568 aaKnown RBP6.78□□□□□ -1.32
PTM1YKL039W RSM26P47141 266 aa6.78□□□□□ -1.32
PTM1YKL039W KIP3P53086 805 aaKnown RBP6.78□□□□□ -1.32
PTM1YKL039W ARI1P53111 347 aaKnown RBP6.78□□□□□ -1.32
PTM1YKL039W FAR11P53917 953 aa6.78□□□□□ -1.32
PTM1YKL039W RAD2P07276 1031 aa6.78□□□□□ -1.32
PTM1YKL039W SQT1P35184 431 aa6.78□□□□□ -1.32
PTM1YKL039W PIC2P40035 300 aa6.78□□□□□ -1.32
PTM1YKL039W NCE103P53615 221 aa6.78□□□□□ -1.32
PTM1YKL039W MEC3Q02574 474 aa6.78□□□□□ -1.32
PTM1YKL039W YMR074CQ04773 145 aa6.78□□□□□ -1.32
PTM1YKL039W PRE9P23638 258 aaKnown RBP6.77□□□□□ -1.33
PTM1YKL039W MSH3P25336 1018 aa6.77□□□□□ -1.33
PTM1YKL039W RSC6P25632 483 aa6.77□□□□□ -1.33
PTM1YKL039W PEX28P38848 579 aa6.77□□□□□ -1.33
PTM1YKL039W MCD1Q12158 566 aa6.77□□□□□ -1.33
PTM1YKL039W REC8Q12188 680 aa6.77□□□□□ -1.33
PTM1YKL039W NEM1P38757 446 aa6.76□□□□□ -1.33
PTM1YKL039W PEX13P80667 386 aa6.76□□□□□ -1.33
PTM1YKL039W DNA2P38859 1522 aa6.75□□□□□ -1.33
PTM1YKL039W YKL077WP36081 392 aa6.75□□□□□ -1.33
PTM1YKL039W PGM1P33401 570 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W ARL1P38116 183 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W REI1P38344 393 aaPredicted RBP6.74□□□□□ -1.33
PTM1YKL039W MRPS18P42847 217 aa6.74□□□□□ -1.33
PTM1YKL039W LSB3P43603 459 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W YGL140CP53120 1219 aa6.74□□□□□ -1.33
PTM1YKL039W YOR223WQ12015 292 aa6.74□□□□□ -1.33
PTM1YKL039W YLL054CQ12244 843 aa6.74□□□□□ -1.33
PTM1YKL039W HEM13P11353 328 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W SEC23P15303 768 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W SLS1P42900 643 aa6.74□□□□□ -1.33
PTM1YKL039W YPL034WQ03083 165 aa6.74□□□□□ -1.33
PTM1YKL039W MTC5Q03897 1148 aa6.74□□□□□ -1.33
PTM1YKL039W ESF1Q06344 628 aaKnown RBP6.74□□□□□ -1.33
PTM1YKL039W RDH54P38086 958 aa6.73□□□□□ -1.33
PTM1YKL039W ALG6Q12001 544 aaKnown RBP6.73□□□□□ -1.33
PTM1YKL039W RMD1Q03441 430 aa6.72□□□□□ -1.33
PTM1YKL039W DOT1Q04089 582 aaKnown RBP6.72□□□□□ -1.33
PTM1YKL039W VMA4P22203 233 aaKnown RBP6.71□□□□□ -1.34
PTM1YKL039W MTR4P47047 1073 aaKnown RBP6.71□□□□□ -1.34
PTM1YKL039W UTP5Q04177 643 aaKnown RBP6.71□□□□□ -1.34
PTM1YKL039W SWR1Q05471 1514 aa6.71□□□□□ -1.34
PTM1YKL039W AKR1P39010 764 aa6.7□□□□□ -1.34
PTM1YKL039W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34 RIP-Chip
PTM1YKL039W PEP7P32609 515 aa6.69□□□□□ -1.34
PTM1YKL039W XKS1P42826 600 aa6.69□□□□□ -1.34
PTM1YKL039W SNU71P53207 620 aaKnown RBP6.69□□□□□ -1.34
PTM1YKL039W KOG1P38873 1557 aa6.69□□□□□ -1.34
PTM1YKL039W NAM7P30771 971 aaKnown RBP6.69□□□□□ -1.34
PTM1YKL039W GPT2P36148 743 aa6.69□□□□□ -1.34
PTM1YKL039W SPO74P45819 413 aa6.69□□□□□ -1.34
PTM1YKL039W YGR045CP53229 120 aa6.69□□□□□ -1.34
PTM1YKL039W GNP1P48813 663 aa6.68□□□□□ -1.34
PTM1YKL039W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34 RIP-Chip
PTM1YKL039W TAF13P11747 167 aa6.67□□□□□ -1.34
PTM1YKL039W COQ2P32378 372 aa6.67□□□□□ -1.34
PTM1YKL039W HDA2Q06629 674 aa6.67□□□□□ -1.34
PTM1YKL039W SAF1P38352 637 aa6.66□□□□□ -1.34
PTM1YKL039W ELA1P53861 379 aaPredicted RBP6.66□□□□□ -1.34
PTM1YKL039W AVO1Q08236 1176 aa6.66□□□□□ -1.34
PTM1YKL039W YLR122CQ12312 125 aa6.66□□□□□ -1.34
PTM1YKL039W YAR028WP39548 234 aa6.65□□□□□ -1.34
PTM1YKL039W MSH4P40965 878 aaPredicted RBP6.65□□□□□ -1.34
PTM1YKL039W GIC2Q06648 383 aa6.65□□□□□ -1.34
PTM1YKL039W GCR1P07261 785 aa6.65□□□□□ -1.35
PTM1YKL039W MRL1Q06815 381 aa6.65□□□□□ -1.35
PTM1YKL039W ADD66P36040 267 aa6.64□□□□□ -1.35
PTM1YKL039W PAM1P37304 830 aaKnown RBP6.64□□□□□ -1.35
PTM1YKL039W SIW14P53965 281 aa6.64□□□□□ -1.35
PTM1YKL039W RKM2Q03942 479 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms