RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C YGL140CP53120 1219 aa4.89□□□□□ -1.63
MSM1YGR171C GDE1Q02979 1223 aa4.89□□□□□ -1.63
MSM1YGR171C RTT10Q08924 1013 aa4.89□□□□□ -1.63
MSM1YGR171C YDL176WQ12027 708 aa4.89□□□□□ -1.63
MSM1YGR171C SOK2P53438 785 aaPredicted RBP4.89□□□□□ -1.63
MSM1YGR171C TAF13P11747 167 aa4.88□□□□□ -1.63
MSM1YGR171C BRN1P38170 754 aa4.88□□□□□ -1.63
MSM1YGR171C JJJ3P47138 172 aa4.88□□□□□ -1.63
MSM1YGR171C HAS1Q03532 505 aaKnown RBP4.88□□□□□ -1.63
MSM1YGR171C TMA46Q12000 345 aaKnown RBP4.88□□□□□ -1.63
MSM1YGR171C SSF2Q12153 453 aaPredicted RBP4.88□□□□□ -1.63
MSM1YGR171C SLP1Q12232 587 aa4.88□□□□□ -1.63
MSM1YGR171C SEC23P15303 768 aaKnown RBP4.87□□□□□ -1.63
MSM1YGR171C VMA4P22203 233 aaKnown RBP4.87□□□□□ -1.63
MSM1YGR171C EXO5P38289 585 aa4.87□□□□□ -1.63
MSM1YGR171C GIP2P40036 548 aa4.87□□□□□ -1.63
MSM1YGR171C FAA4P47912 694 aaKnown RBP4.87□□□□□ -1.63
MSM1YGR171C UTP22P53254 1237 aaPredicted RBP4.87□□□□□ -1.63
MSM1YGR171C YIG1Q08956 461 aa4.87□□□□□ -1.63
MSM1YGR171C DPH6Q12429 685 aa4.87□□□□□ -1.63
MSM1YGR171C NAR1P23503 491 aaKnown RBP4.86□□□□□ -1.63
MSM1YGR171C RAD27P26793 382 aa4.86□□□□□ -1.63
MSM1YGR171C DUT1P33317 147 aa4.86□□□□□ -1.63
MSM1YGR171C PGM2P37012 569 aaKnown RBP4.86□□□□□ -1.63
MSM1YGR171C YGR053CP53234 283 aa4.86□□□□□ -1.63
MSM1YGR171C SPO71Q03868 1245 aa4.86□□□□□ -1.63
MSM1YGR171C GIS4Q04233 774 aa4.86□□□□□ -1.63
MSM1YGR171C HPF1Q05164 967 aa4.86□□□□□ -1.63
MSM1YGR171C HDA2Q06629 674 aa4.86□□□□□ -1.63
MSM1YGR171C SRP40P32583 406 aaPredicted RBP4.86□□□□□ -1.63
MSM1YGR171C ALG14P38242 237 aa4.86□□□□□ -1.63
MSM1YGR171C IOC4Q04213 475 aa4.86□□□□□ -1.63
MSM1YGR171C TY1A-LR4P0C2I8 440 aaKnown RBP4.85□□□□□ -1.63
MSM1YGR171C TY1A-DR6P0CX70 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-ER1P0CX71 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-LR2P0CX72 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-PLP0CX73 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-JR1P0CX74 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-LR3P0CX75 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-ML2P0CX76 440 aa4.85□□□□□ -1.63
MSM1YGR171C HEM13P11353 328 aaKnown RBP4.85□□□□□ -1.63
MSM1YGR171C RDH54P38086 958 aa4.85□□□□□ -1.63
MSM1YGR171C PAN5P38787 379 aa4.85□□□□□ -1.63
MSM1YGR171C NMD2P38798 1089 aaKnown RBP4.85□□□□□ -1.63
MSM1YGR171C TED1P40533 473 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-GR1Q12085 440 aa4.85□□□□□ -1.63
MSM1YGR171C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.85□□□□□ -1.63
MSM1YGR171C TY1A-OLQ92392 440 aaKnown RBP4.85□□□□□ -1.63
MSM1YGR171C SAC7P17121 654 aa4.84□□□□□ -1.63
MSM1YGR171C ATG14P38270 344 aa4.84□□□□□ -1.63
MSM1YGR171C MTR4P47047 1073 aaKnown RBP4.84□□□□□ -1.63
MSM1YGR171C YJL049WP47048 450 aa4.84□□□□□ -1.63
MSM1YGR171C GCV1P48015 400 aa4.84□□□□□ -1.63
MSM1YGR171C GNP1P48813 663 aa4.84□□□□□ -1.63
MSM1YGR171C YGR035CP53222 116 aa4.84□□□□□ -1.63
MSM1YGR171C SIW14P53965 281 aa4.84□□□□□ -1.63
MSM1YGR171C DOS2P54858 310 aa4.84□□□□□ -1.63
MSM1YGR171C NHA1Q99271 985 aa4.84□□□□□ -1.63
MSM1YGR171C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
MSM1YGR171C PRI2P20457 528 aa4.83□□□□□ -1.64
MSM1YGR171C SPC42P36094 363 aa4.83□□□□□ -1.64
MSM1YGR171C ARL1P38116 183 aaKnown RBP4.83□□□□□ -1.64
MSM1YGR171C POL5P39985 1022 aaKnown RBP4.83□□□□□ -1.64
MSM1YGR171C ENT3P47160 408 aa4.83□□□□□ -1.64
MSM1YGR171C RNH70P53331 553 aa4.83□□□□□ -1.64
MSM1YGR171C MEC3Q02574 474 aa4.83□□□□□ -1.64
MSM1YGR171C UTP5Q04177 643 aaKnown RBP4.83□□□□□ -1.64
MSM1YGR171C OPI10Q08202 246 aa4.83□□□□□ -1.64
MSM1YGR171C FAL1Q12099 399 aaKnown RBP4.83□□□□□ -1.64
MSM1YGR171C REC8Q12188 680 aa4.83□□□□□ -1.64
MSM1YGR171C TY4B-PA0A0B7P3V8 1104 aa4.82□□□□□ -1.64
MSM1YGR171C DED1P06634 604 aaKnown RBP4.82□□□□□ -1.64
MSM1YGR171C ADD66P36040 267 aa4.82□□□□□ -1.64
MSM1YGR171C NEM1P38757 446 aa4.82□□□□□ -1.64
MSM1YGR171C SLS1P42900 643 aa4.82□□□□□ -1.64
MSM1YGR171C FAR11P53917 953 aa4.82□□□□□ -1.64
MSM1YGR171C EEB1Q02891 456 aa4.82□□□□□ -1.64
MSM1YGR171C YMR074CQ04773 145 aa4.82□□□□□ -1.64
MSM1YGR171C EST2Q06163 884 aa4.82□□□□□ -1.64
MSM1YGR171C YLL054CQ12244 843 aa4.82□□□□□ -1.64
MSM1YGR171C TY4A-HQ6Q5P6 413 aa4.82□□□□□ -1.64
MSM1YGR171C GRX1P25373 110 aaKnown RBP4.81□□□□□ -1.64
MSM1YGR171C YKL091CP33324 310 aaKnown RBP4.81□□□□□ -1.64
MSM1YGR171C REI1P38344 393 aaPredicted RBP4.81□□□□□ -1.64
MSM1YGR171C HXT13P39924 564 aa4.81□□□□□ -1.64
MSM1YGR171C IOC3P43596 787 aa4.81□□□□□ -1.64
MSM1YGR171C OSW7P43611 510 aa4.81□□□□□ -1.64
MSM1YGR171C TYW3P53177 273 aa4.81□□□□□ -1.64
MSM1YGR171C HXT17P53631 564 aa4.81□□□□□ -1.64
MSM1YGR171C HXT15P54854 567 aa4.81□□□□□ -1.64
MSM1YGR171C ROD1Q02805 837 aa4.81□□□□□ -1.64
MSM1YGR171C ELG1Q12050 791 aa4.81□□□□□ -1.64
MSM1YGR171C TRP2P00899 507 aaKnown RBP4.8□□□□□ -1.64
MSM1YGR171C BAS1P22035 811 aa4.8□□□□□ -1.64
MSM1YGR171C RER2P35196 286 aa4.8□□□□□ -1.64
MSM1YGR171C MAE1P36013 669 aaKnown RBP4.8□□□□□ -1.64
MSM1YGR171C KRI1P42846 591 aaKnown RBP4.8□□□□□ -1.64
MSM1YGR171C DSE4P53753 1117 aa4.8□□□□□ -1.64
MSM1YGR171C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
MSM1YGR171C SPO20Q04359 397 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms