RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W NAP1P25293 417 aaKnown RBP3.27□□□□□ -1.89
SMD1YGR074W BOI1P38041 980 aaKnown RBP3.27□□□□□ -1.89
SMD1YGR074W SEA4P38164 1038 aa3.27□□□□□ -1.89
SMD1YGR074W YNR065CP53751 1116 aa3.27□□□□□ -1.89
SMD1YGR074W UFD2P54860 961 aa3.27□□□□□ -1.89
SMD1YGR074W YMR074CQ04773 145 aa3.27□□□□□ -1.89
SMD1YGR074W YOR223WQ12015 292 aa3.27□□□□□ -1.89
SMD1YGR074W YLL054CQ12244 843 aa3.27□□□□□ -1.89
SMD1YGR074W YJR124CP47159 448 aa3.26□□□□□ -1.89
SMD1YGR074W RCM1P53972 490 aa3.26□□□□□ -1.89
SMD1YGR074W TRS120Q04183 1289 aa3.26□□□□□ -1.89
SMD1YGR074W GSF2Q04697 403 aaKnown RBP3.26□□□□□ -1.89
SMD1YGR074W SVF1Q05515 481 aa3.26□□□□□ -1.89
SMD1YGR074W NUT2Q06213 157 aa3.26□□□□□ -1.89
SMD1YGR074W GCD6P32501 712 aaKnown RBP3.25□□□□□ -1.89
SMD1YGR074W SMC1P32908 1225 aa3.25□□□□□ -1.89
SMD1YGR074W YHL008CP38750 627 aa3.25□□□□□ -1.89
SMD1YGR074W SUT1P53032 299 aaKnown RBP3.25□□□□□ -1.89
SMD1YGR074W HAS1Q03532 505 aaKnown RBP3.25□□□□□ -1.89
SMD1YGR074W WHI3P34761 661 aaKnown RBP3.24□□□□□ -1.89
SMD1YGR074W GPT2P36148 743 aa3.24□□□□□ -1.89
SMD1YGR074W NTA1P40354 457 aa3.24□□□□□ -1.89
SMD1YGR074W FET4P40988 552 aa3.24□□□□□ -1.89
SMD1YGR074W RGD2P43556 714 aa3.24□□□□□ -1.89
SMD1YGR074W SAM37P50110 327 aa3.24□□□□□ -1.89
SMD1YGR074W OYE2Q03558 400 aaKnown RBP3.24□□□□□ -1.89
SMD1YGR074W CDA2Q06703 312 aa3.24□□□□□ -1.89
SMD1YGR074W OXR1Q08952 273 aa3.24□□□□□ -1.89
SMD1YGR074W WHI5Q12416 295 aa3.24□□□□□ -1.89
SMD1YGR074W FRT1Q99332 602 aa3.24□□□□□ -1.89
SMD1YGR074W HSP78P33416 811 aa3.23□□□□□ -1.89
SMD1YGR074W PAM1P37304 830 aaKnown RBP3.23□□□□□ -1.89
SMD1YGR074W ADP1P25371 1049 aa3.22□□□□□ -1.89
SMD1YGR074W MET4P32389 672 aa3.22□□□□□ -1.89
SMD1YGR074W IRS4P36115 615 aaKnown RBP3.22□□□□□ -1.89
SMD1YGR074W ECM2P38241 364 aaKnown RBP3.22□□□□□ -1.89
SMD1YGR074W CIC1P38779 376 aaKnown RBP3.22□□□□□ -1.89
SMD1YGR074W RAD55P38953 406 aa3.22□□□□□ -1.89
SMD1YGR074W YNL011CP53980 444 aa3.22□□□□□ -1.89
SMD1YGR074W DOT1Q04089 582 aaKnown RBP3.22□□□□□ -1.89
SMD1YGR074W APC11Q12157 165 aa3.22□□□□□ -1.89
SMD1YGR074W GLO4Q12320 285 aa3.22□□□□□ -1.89
SMD1YGR074W HVG1P0CE11 249 aa3.21□□□□□ -1.9
SMD1YGR074W ATE1P16639 503 aa3.21□□□□□ -1.9
SMD1YGR074W RPB10P22139 70 aa3.21□□□□□ -1.9
SMD1YGR074W NFS1P25374 497 aa3.21□□□□□ -1.9
SMD1YGR074W SEC8P32855 1065 aa3.21□□□□□ -1.9
SMD1YGR074W THI80P35202 319 aa3.21□□□□□ -1.9
SMD1YGR074W FLR1P38124 548 aa3.21□□□□□ -1.9
SMD1YGR074W PSY2P40164 858 aa3.21□□□□□ -1.9
SMD1YGR074W CDC55Q00362 526 aa3.21□□□□□ -1.9
SMD1YGR074W MSH6Q03834 1242 aa3.21□□□□□ -1.9
SMD1YGR074W JIP5Q06214 492 aaPredicted RBP3.21□□□□□ -1.9
SMD1YGR074W NOC3Q07896 663 aaPredicted RBP3.21□□□□□ -1.9
SMD1YGR074W PEP7P32609 515 aa3.2□□□□□ -1.9
SMD1YGR074W RPT1P33299 467 aaKnown RBP3.2□□□□□ -1.9
SMD1YGR074W VPS35P34110 944 aa3.2□□□□□ -1.9
SMD1YGR074W TSA1P34760 196 aaKnown RBP3.2□□□□□ -1.9
SMD1YGR074W YJR107WP47145 328 aa3.2□□□□□ -1.9
SMD1YGR074W BSC2Q05611 235 aa3.2□□□□□ -1.9
SMD1YGR074W TIF6Q12522 245 aaKnown RBP3.2□□□□□ -1.9
SMD1YGR074W RPS4AP0CX35 261 aaKnown RBP3.19□□□□□ -1.9
SMD1YGR074W RPS4BP0CX36 261 aaKnown RBP3.19□□□□□ -1.9
SMD1YGR074W PYC2P32327 1180 aaKnown RBP3.19□□□□□ -1.9
SMD1YGR074W MAD1P40957 749 aa3.19□□□□□ -1.9
SMD1YGR074W OYE3P41816 400 aaPredicted RBP3.19□□□□□ -1.9
SMD1YGR074W GCV1P48015 400 aa3.19□□□□□ -1.9
SMD1YGR074W RRP15Q06511 250 aaPredicted RBP3.19□□□□□ -1.9
SMD1YGR074W PHO4P07270 312 aaKnown RBP3.18□□□□□ -1.9
SMD1YGR074W DAK2P43550 591 aa3.18□□□□□ -1.9
SMD1YGR074W ORC3P54790 616 aa3.18□□□□□ -1.9
SMD1YGR074W TRE1Q08919 783 aa3.18□□□□□ -1.9
SMD1YGR074W KAR2P16474 682 aaKnown RBP3.17□□□□□ -1.9
SMD1YGR074W PRP6P19735 899 aaPredicted RBP3.17□□□□□ -1.9
SMD1YGR074W CLN2P20438 545 aa3.17□□□□□ -1.9
SMD1YGR074W NNF1P47149 201 aa3.17□□□□□ -1.9
SMD1YGR074W RMD1Q03441 430 aa3.17□□□□□ -1.9
SMD1YGR074W SSY1Q03770 852 aa3.17□□□□□ -1.9
SMD1YGR074W ESF1Q06344 628 aaKnown RBP3.17□□□□□ -1.9
SMD1YGR074W GPI13Q07830 1017 aa3.17□□□□□ -1.9
SMD1YGR074W MNL2Q12205 849 aa3.17□□□□□ -1.9
SMD1YGR074W PRE9P23638 258 aaKnown RBP3.16□□□□□ -1.9
SMD1YGR074W RPS26AP39938 119 aaKnown RBP3.16□□□□□ -1.9
SMD1YGR074W RPS26BP39939 119 aaKnown RBP3.16□□□□□ -1.9
SMD1YGR074W CWC24P53769 259 aa3.16□□□□□ -1.9
SMD1YGR074W RSC4Q02206 625 aa3.16□□□□□ -1.9
SMD1YGR074W MEC3Q02574 474 aa3.16□□□□□ -1.9
SMD1YGR074W INP54Q08227 384 aaKnown RBP3.16□□□□□ -1.9
SMD1YGR074W YIG1Q08956 461 aa3.16□□□□□ -1.9
SMD1YGR074W MCM2P29469 868 aa3.15□□□□□ -1.91
SMD1YGR074W PRO1P32264 428 aa3.15□□□□□ -1.91
SMD1YGR074W FYV10P40492 516 aa3.15□□□□□ -1.91
SMD1YGR074W MSH4P40965 878 aaPredicted RBP3.15□□□□□ -1.91
SMD1YGR074W MRPS18P42847 217 aa3.15□□□□□ -1.91
SMD1YGR074W YGR122WP53272 402 aa3.15□□□□□ -1.91
SMD1YGR074W DAL4Q04895 635 aa3.15□□□□□ -1.91
SMD1YGR074W SPR28Q04921 423 aa3.15□□□□□ -1.91
SMD1YGR074W YCS4Q06156 1176 aa3.15□□□□□ -1.91
SMD1YGR074W HTS1P07263 546 aaKnown RBP3.14□□□□□ -1.91
SMD1YGR074W KTR2P33550 425 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 95.4 ms