RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W TFB2Q02939 513 aa8.08□□□□□ -1.12
SNU71YGR013W SVL3Q03088 825 aaKnown RBP8.08□□□□□ -1.12
SNU71YGR013W SPO20Q04359 397 aa8.08□□□□□ -1.12
SNU71YGR013W SEA4P38164 1038 aa8.07□□□□□ -1.12
SNU71YGR013W ERP2P39704 215 aa8.07□□□□□ -1.12
SNU71YGR013W IRR1P40541 1150 aa8.07□□□□□ -1.12
SNU71YGR013W XKS1P42826 600 aa8.07□□□□□ -1.12
SNU71YGR013W YGR237CP50089 785 aa8.07□□□□□ -1.12
SNU71YGR013W TAF8Q03750 510 aa8.07□□□□□ -1.12
SNU71YGR013W EAF1Q06337 982 aa8.07□□□□□ -1.12
SNU71YGR013W SIN3P22579 1536 aa8.07□□□□□ -1.12
SNU71YGR013W ABD1P32783 436 aaPredicted RBP8.06□□□□□ -1.12
SNU71YGR013W VBA5P36172 582 aa8.06□□□□□ -1.12
SNU71YGR013W ERP6P53198 216 aa8.06□□□□□ -1.12
SNU71YGR013W SHE9Q04172 456 aa8.06□□□□□ -1.12
SNU71YGR013W NKP1Q12493 238 aa8.06□□□□□ -1.12
SNU71YGR013W SRF1Q12516 437 aa8.06□□□□□ -1.12
SNU71YGR013W SBP1P10080 294 aaKnown RBP8.06□□□□□ -1.12
SNU71YGR013W ARE1P25628 610 aa8.06□□□□□ -1.12
SNU71YGR013W DUR3P33413 735 aa8.06□□□□□ -1.12
SNU71YGR013W MRP8P35719 219 aa8.06□□□□□ -1.12
SNU71YGR013W NUT1P53114 1132 aa8.06□□□□□ -1.12
SNU71YGR013W BRE1Q07457 700 aaKnown RBP8.06□□□□□ -1.12
SNU71YGR013W HLJ1P48353 224 aa8.05□□□□□ -1.12
SNU71YGR013W SPP1Q03012 353 aa8.05□□□□□ -1.12
SNU71YGR013W MLF3P32047 452 aa8.04□□□□□ -1.12
SNU71YGR013W BET3P36149 193 aa8.04□□□□□ -1.12
SNU71YGR013W HUL4P40985 892 aa8.04□□□□□ -1.12
SNU71YGR013W UGO1Q03327 502 aa8.04□□□□□ -1.12
SNU71YGR013W DFG5Q05031 458 aa8.04□□□□□ -1.12
SNU71YGR013W PUS5Q06244 254 aa8.04□□□□□ -1.12
SNU71YGR013W TMA7Q3E764 64 aaKnown RBP8.04□□□□□ -1.12
SNU71YGR013W TRP2P00899 507 aaKnown RBP8.04□□□□□ -1.12
SNU71YGR013W SNF7P39929 240 aaKnown RBP8.04□□□□□ -1.12
SNU71YGR013W NIT1P40447 199 aa8.04□□□□□ -1.12
SNU71YGR013W PUF4P25339 888 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
SNU71YGR013W SBA1P28707 216 aaKnown RBP8.03□□□□□ -1.12
SNU71YGR013W BSD2P38356 321 aa8.03□□□□□ -1.12
SNU71YGR013W MAL11P53048 616 aa8.03□□□□□ -1.12
SNU71YGR013W UTP8P53276 713 aaKnown RBP8.03□□□□□ -1.12
SNU71YGR013W SND1Q04007 877 aa8.03□□□□□ -1.12
SNU71YGR013W LDB19Q12502 818 aa8.03□□□□□ -1.12
SNU71YGR013W RPP2BP02400 110 aaKnown RBP8.02□□□□□ -1.12
SNU71YGR013W DAS1P47005 663 aa8.02□□□□□ -1.12
SNU71YGR013W TY4A-JP47023 414 aa8.02□□□□□ -1.12
SNU71YGR013W SYH1Q02875 849 aaKnown RBP8.02□□□□□ -1.12
SNU71YGR013W VMS1Q04311 632 aaKnown RBP8.02□□□□□ -1.12
SNU71YGR013W PTC2P39966 464 aaKnown RBP8.02□□□□□ -1.13
SNU71YGR013W AIM21P40563 679 aa8.02□□□□□ -1.13
SNU71YGR013W PMT3P47190 753 aa8.02□□□□□ -1.13
SNU71YGR013W HSV2P50079 448 aaPredicted RBP8.02□□□□□ -1.13
SNU71YGR013W ALO1P54783 526 aaKnown RBP8.02□□□□□ -1.13
SNU71YGR013W ATG16Q03818 150 aa8.02□□□□□ -1.13
SNU71YGR013W MSH6Q03834 1242 aa8.02□□□□□ -1.13
SNU71YGR013W NAB2P32505 525 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
SNU71YGR013W PEX6P33760 1030 aa8.01□□□□□ -1.13
SNU71YGR013W ISW1P38144 1129 aa8.01□□□□□ -1.13
SNU71YGR013W RVS167P39743 482 aaKnown RBP8.01□□□□□ -1.13
SNU71YGR013W YLR225CQ05948 407 aaKnown RBP8.01□□□□□ -1.13
SNU71YGR013W TAF2P23255 1407 aa8.01□□□□□ -1.13
SNU71YGR013W BPT1P14772 1559 aa8□□□□□ -1.13
SNU71YGR013W RER2P35196 286 aa8□□□□□ -1.13
SNU71YGR013W PBY1P38254 753 aa8□□□□□ -1.13
SNU71YGR013W HXT13P39924 564 aa8□□□□□ -1.13
SNU71YGR013W KIP3P53086 805 aaKnown RBP8□□□□□ -1.13
SNU71YGR013W GPG1P53130 126 aa8□□□□□ -1.13
SNU71YGR013W HXT17P53631 564 aa8□□□□□ -1.13
SNU71YGR013W HXT15P54854 567 aa8□□□□□ -1.13
SNU71YGR013W COG4Q06096 861 aa8□□□□□ -1.13
SNU71YGR013W HDA2Q06629 674 aa8□□□□□ -1.13
SNU71YGR013W HIR1P32479 840 aa8□□□□□ -1.13
SNU71YGR013W YBL086CP38177 466 aa8□□□□□ -1.13
SNU71YGR013W GIP1P38229 639 aa8□□□□□ -1.13
SNU71YGR013W RSM26P47141 266 aa8□□□□□ -1.13
SNU71YGR013W YGR021WP53212 290 aa8□□□□□ -1.13
SNU71YGR013W THI73Q07904 523 aa8□□□□□ -1.13
SNU71YGR013W NCR1Q12200 1170 aa8□□□□□ -1.13
SNU71YGR013W NUP145P49687 1317 aa8□□□□□ -1.13
SNU71YGR013W DPS1P04802 557 aaKnown RBP7.99□□□□□ -1.13
SNU71YGR013W ATP4P05626 244 aa7.99□□□□□ -1.13
SNU71YGR013W PIF1P07271 859 aa7.99□□□□□ -1.13
SNU71YGR013W DPB3P27344 201 aa7.99□□□□□ -1.13
SNU71YGR013W LYP1P32487 611 aa7.99□□□□□ -1.13
SNU71YGR013W SQT1P35184 431 aa7.99□□□□□ -1.13
SNU71YGR013W SPT23P35210 1082 aa7.99□□□□□ -1.13
SNU71YGR013W MPE1P35728 441 aaKnown RBP7.99□□□□□ -1.13
SNU71YGR013W ECM2P38241 364 aaKnown RBP7.99□□□□□ -1.13
SNU71YGR013W KRI1P42846 591 aaKnown RBP7.99□□□□□ -1.13
SNU71YGR013W YNL193WP53870 558 aa7.99□□□□□ -1.13
SNU71YGR013W FRK1Q03002 865 aaPredicted RBP7.99□□□□□ -1.13
SNU71YGR013W NYV1Q12255 253 aa7.99□□□□□ -1.13
SNU71YGR013W SKI3P17883 1432 aaKnown RBP7.99□□□□□ -1.13
SNU71YGR013W PEX28P38848 579 aa7.98□□□□□ -1.13
SNU71YGR013W GDH3P39708 457 aa7.98□□□□□ -1.13
SNU71YGR013W ALR2P43553 858 aa7.98□□□□□ -1.13
SNU71YGR013W TGL2P54857 326 aa7.98□□□□□ -1.13
SNU71YGR013W UME1Q03010 460 aa7.98□□□□□ -1.13
SNU71YGR013W EMG1Q06287 252 aaKnown RBP7.98□□□□□ -1.13
SNU71YGR013W SSK2P53599 1579 aa7.98□□□□□ -1.13
SNU71YGR013W HEM13P11353 328 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms