RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C ISU2Q12056 156 aa3.67□□□□□ -1.82
VPS3YDR495C TY4A-HQ6Q5P6 413 aa3.67□□□□□ -1.82
VPS3YDR495C SBP1P10080 294 aaKnown RBP3.66□□□□□ -1.82
VPS3YDR495C PFD1P46988 109 aa3.66□□□□□ -1.82
VPS3YDR495C ULP1Q02724 621 aa3.66□□□□□ -1.82
VPS3YDR495C RRI2Q12348 645 aa3.66□□□□□ -1.82
VPS3YDR495C GAL1P04385 528 aa3.66□□□□□ -1.82
VPS3YDR495C APA1P16550 321 aaKnown RBP3.66□□□□□ -1.82
VPS3YDR495C TYS1P36421 394 aaKnown RBP3.66□□□□□ -1.82
VPS3YDR495C RAD55P38953 406 aa3.66□□□□□ -1.82
VPS3YDR495C PAC1P39946 494 aaKnown RBP3.66□□□□□ -1.82
VPS3YDR495C IRR1P40541 1150 aa3.66□□□□□ -1.82
VPS3YDR495C ALR2P43553 858 aa3.66□□□□□ -1.82
VPS3YDR495C MON1P53129 644 aa3.66□□□□□ -1.82
VPS3YDR495C YLR225CQ05948 407 aaKnown RBP3.66□□□□□ -1.82
VPS3YDR495C VAC17P25591 423 aa3.65□□□□□ -1.82
VPS3YDR495C BAP2P38084 609 aa3.65□□□□□ -1.82
VPS3YDR495C DSS1P39112 969 aa3.65□□□□□ -1.82
VPS3YDR495C GDH3P39708 457 aa3.65□□□□□ -1.82
VPS3YDR495C TIF4632P39936 914 aaKnown RBP3.65□□□□□ -1.82
VPS3YDR495C TRE2Q08693 809 aa3.65□□□□□ -1.82
VPS3YDR495C MEF1P25039 761 aa3.65□□□□□ -1.83
VPS3YDR495C PUF4P25339 888 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
VPS3YDR495C MRP8P35719 219 aa3.65□□□□□ -1.83
VPS3YDR495C APL2P36000 726 aaPredicted RBP3.65□□□□□ -1.83
VPS3YDR495C SEA4P38164 1038 aa3.65□□□□□ -1.83
VPS3YDR495C HXT5P38695 592 aa3.65□□□□□ -1.83
VPS3YDR495C XKS1P42826 600 aa3.65□□□□□ -1.83
VPS3YDR495C MAL11P53048 616 aa3.65□□□□□ -1.83
VPS3YDR495C ELP4Q02884 456 aaKnown RBP3.65□□□□□ -1.83
VPS3YDR495C ADI1Q03677 179 aa3.65□□□□□ -1.83
VPS3YDR495C YDL124WQ07551 312 aaKnown RBP3.65□□□□□ -1.83
VPS3YDR495C YOL087CQ99247 1116 aa3.65□□□□□ -1.83
VPS3YDR495C TAF13P11747 167 aa3.65□□□□□ -1.83
VPS3YDR495C DAT1P13483 248 aaKnown RBP3.65□□□□□ -1.83
VPS3YDR495C KAR2P16474 682 aaKnown RBP3.65□□□□□ -1.83
VPS3YDR495C SEC2P17065 759 aa3.65□□□□□ -1.83
VPS3YDR495C AGP1P25376 633 aa3.65□□□□□ -1.83
VPS3YDR495C VMA3P25515 160 aa3.65□□□□□ -1.83
VPS3YDR495C KXD1P53158 218 aa3.65□□□□□ -1.83
VPS3YDR495C TY1A-DR4O74302 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-HP0C2I4 478 aaKnown RBP3.64□□□□□ -1.83
VPS3YDR495C TY1A-AP0CX57 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-PR1P0CX58 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-ORP0CX59 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-PR2P0CX60 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-DR5P0CX65 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-ER2P0CX66 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-GR3P0CX67 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-LR1P0CX68 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-MR2P0CX69 440 aa3.64□□□□□ -1.83
VPS3YDR495C UTR2P32623 467 aa3.64□□□□□ -1.83
VPS3YDR495C PTC4P38089 393 aa3.64□□□□□ -1.83
VPS3YDR495C HSE1P38753 452 aa3.64□□□□□ -1.83
VPS3YDR495C EMW1P42842 904 aaKnown RBP3.64□□□□□ -1.83
VPS3YDR495C TY1A-JR2P47099 440 aa3.64□□□□□ -1.83
VPS3YDR495C NMA111P53920 997 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-DR1Q03856 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-ML1Q04706 440 aaKnown RBP3.64□□□□□ -1.83
VPS3YDR495C GRC3Q07845 632 aa3.64□□□□□ -1.83
VPS3YDR495C TMA46Q12000 345 aaKnown RBP3.64□□□□□ -1.83
VPS3YDR495C TY1A-BRQ12217 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-NL2Q12470 440 aa3.64□□□□□ -1.83
VPS3YDR495C TY1A-GR2Q12485 440 aa3.64□□□□□ -1.83
VPS3YDR495C PTH2P34222 208 aa3.64□□□□□ -1.83
VPS3YDR495C UTP8P53276 713 aaKnown RBP3.64□□□□□ -1.83
VPS3YDR495C GIC2Q06648 383 aa3.64□□□□□ -1.83
VPS3YDR495C FLP1P03870 423 aa3.63□□□□□ -1.83
VPS3YDR495C PTP2P29461 750 aa3.63□□□□□ -1.83
VPS3YDR495C MKK2P32491 506 aa3.63□□□□□ -1.83
VPS3YDR495C SPT16P32558 1035 aaKnown RBP3.63□□□□□ -1.83
VPS3YDR495C HSP78P33416 811 aa3.63□□□□□ -1.83
VPS3YDR495C MOT2P34909 587 aaKnown RBP3.63□□□□□ -1.83
VPS3YDR495C TAF1P46677 1066 aa3.63□□□□□ -1.83
VPS3YDR495C YML131WQ03102 365 aa3.63□□□□□ -1.83
VPS3YDR495C HFD1Q04458 532 aa3.63□□□□□ -1.83
VPS3YDR495C TIF6Q12522 245 aaKnown RBP3.63□□□□□ -1.83
VPS3YDR495C NHA1Q99271 985 aa3.63□□□□□ -1.83
VPS3YDR495C TRP2P00899 507 aaKnown RBP3.63□□□□□ -1.83
VPS3YDR495C MUM2P38236 366 aa3.63□□□□□ -1.83
VPS3YDR495C MNT3P40549 630 aa3.63□□□□□ -1.83
VPS3YDR495C KRE33P53914 1056 aaKnown RBP3.63□□□□□ -1.83
VPS3YDR495C PEX29Q03370 554 aa3.63□□□□□ -1.83
VPS3YDR495C SHE9Q04172 456 aa3.63□□□□□ -1.83
VPS3YDR495C DBF20P32328 564 aa3.62□□□□□ -1.83
VPS3YDR495C KTR4P38131 464 aa3.62□□□□□ -1.83
VPS3YDR495C LDH1P38139 375 aa3.62□□□□□ -1.83
VPS3YDR495C PBY1P38254 753 aa3.62□□□□□ -1.83
VPS3YDR495C RIM4P38741 713 aa3.62□□□□□ -1.83
VPS3YDR495C PSY2P40164 858 aa3.62□□□□□ -1.83
VPS3YDR495C SEC26P41810 973 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C RGD2P43556 714 aa3.62□□□□□ -1.83
VPS3YDR495C HXT10P43581 546 aa3.62□□□□□ -1.83
VPS3YDR495C APP1P53933 587 aa3.62□□□□□ -1.83
VPS3YDR495C PML39Q03760 334 aa3.62□□□□□ -1.83
VPS3YDR495C HOM3P10869 527 aa3.62□□□□□ -1.83
VPS3YDR495C SBA1P28707 216 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C NIC96P34077 839 aa3.62□□□□□ -1.83
VPS3YDR495C EAP1P36041 632 aaKnown RBP3.62□□□□□ -1.83
VPS3YDR495C TRZ1P36159 838 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms