RNA–Protein interactions for RNA: YDR473C

PRP3, Transcript of Splicing factor, yeast

Gene PRP3, Length 1,410 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP3	YDR473C	PPM2	Q08282	695 aa		4.86	□□□□□ -1.63
PRP3	YDR473C	SWI5	P08153	709 aa		4.85	□□□□□ -1.63
PRP3	YDR473C	TBS1	P38114	1094 aa		4.85	□□□□□ -1.63
PRP3	YDR473C	CHZ1	P40019	153 aa	Predicted RBP	4.85	□□□□□ -1.63
PRP3	YDR473C	UTP7	P40055	554 aa	Known RBP	4.85	□□□□□ -1.63
PRP3	YDR473C	MRPS18	P42847	217 aa		4.85	□□□□□ -1.63
PRP3	YDR473C	ECM16	Q04217	1267 aa	Known RBP	4.85	□□□□□ -1.63
PRP3	YDR473C	HXK1	P04806	485 aa	Known RBP	4.84	□□□□□ -1.63
PRP3	YDR473C	KAR1	P11927	433 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	SEC6	P32844	805 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	ALA1	P40825	983 aa	Known RBP	4.84	□□□□□ -1.63
PRP3	YDR473C	TYW3	P53177	273 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	DAL4	Q04895	635 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	BSC2	Q05611	235 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	OPI10	Q08202	246 aa		4.84	□□□□□ -1.63
PRP3	YDR473C	CDC34	P14682	295 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	OMA1	P36163	345 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	SHM1	P37292	490 aa	Predicted RBP	4.83	□□□□□ -1.64
PRP3	YDR473C	SPF1	P39986	1215 aa	Known RBP	4.83	□□□□□ -1.64
PRP3	YDR473C	DNM1	P54861	757 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	TY1A-DR2	Q03964	440 aa	Known RBP	4.83	□□□□□ -1.64
PRP3	YDR473C	YDL121C	Q07541	149 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	FLC1	Q08967	793 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	MCD1	Q12158	566 aa		4.83	□□□□□ -1.64
PRP3	YDR473C	PRE9	P23638	258 aa	Known RBP	4.82	□□□□□ -1.64
PRP3	YDR473C	SMC1	P32908	1225 aa		4.82	□□□□□ -1.64
PRP3	YDR473C	KTR2	P33550	425 aa		4.82	□□□□□ -1.64
PRP3	YDR473C	FOL1	P53848	824 aa		4.82	□□□□□ -1.64
PRP3	YDR473C	FAL1	Q12099	399 aa	Known RBP	4.82	□□□□□ -1.64
PRP3	YDR473C	PSH1	Q12161	406 aa		4.82	□□□□□ -1.64
PRP3	YDR473C	NOP14	Q99207	810 aa	Known RBP	4.82	□□□□□ -1.64
PRP3	YDR473C	PDC6	P26263	563 aa	Known RBP	4.81	□□□□□ -1.64
PRP3	YDR473C	YKL069W	P36088	180 aa		4.81	□□□□□ -1.64
PRP3	YDR473C	YHR020W	P38708	688 aa	Known RBP	4.81	□□□□□ -1.64
PRP3	YDR473C	YGR125W	P53273	1036 aa		4.81	□□□□□ -1.64
PRP3	YDR473C	MDG1	P53885	366 aa		4.81	□□□□□ -1.64
PRP3	YDR473C	INP54	Q08227	384 aa	Known RBP	4.81	□□□□□ -1.64
PRP3	YDR473C	ADR1	P07248	1323 aa		4.81	□□□□□ -1.64
PRP3	YDR473C	ERR1	P0CX10	437 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	ERR2	P0CX11	437 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	GAL11	P19659	1081 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	MRPL33	P20084	86 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	RSP5	P39940	809 aa	Known RBP	4.8	□□□□□ -1.64
PRP3	YDR473C	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	OSH2	Q12451	1283 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	BAS1	P22035	811 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	MRC1	P25588	1096 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	RAD27	P26793	382 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	ENP1	P38333	483 aa	Known RBP	4.8	□□□□□ -1.64
PRP3	YDR473C	HXT8	P40886	569 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	ITC1	P53125	1264 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	YNR029C	P53729	429 aa	Known RBP	4.8	□□□□□ -1.64
PRP3	YDR473C	RSC4	Q02206	625 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	CEF1	Q03654	590 aa	Predicted RBP	4.8	□□□□□ -1.64
PRP3	YDR473C	SPO75	Q07798	868 aa		4.8	□□□□□ -1.64
PRP3	YDR473C	SFP1	P32432	683 aa		4.79	□□□□□ -1.64
PRP3	YDR473C	HXT5	P38695	592 aa		4.79	□□□□□ -1.64
PRP3	YDR473C	RPA135	P22138	1203 aa	Known RBP	4.78	□□□□□ -1.64
PRP3	YDR473C	PWP2	P25635	923 aa	Known RBP	4.78	□□□□□ -1.64
PRP3	YDR473C	PRP40	P33203	583 aa	Known RBP	4.78	□□□□□ -1.64
PRP3	YDR473C	DUT1	P33317	147 aa		4.78	□□□□□ -1.64
PRP3	YDR473C	FUI1	P38196	639 aa		4.78	□□□□□ -1.64
PRP3	YDR473C	RAD55	P38953	406 aa		4.78	□□□□□ -1.64
PRP3	YDR473C	ERP2	P39704	215 aa		4.78	□□□□□ -1.64
PRP3	YDR473C	TMA64	Q04600	565 aa	Known RBP	4.78	□□□□□ -1.64
PRP3	YDR473C	YCS4	Q06156	1176 aa		4.78	□□□□□ -1.64
PRP3	YDR473C	RPP1A	P05318	106 aa	Predicted RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	KAR2	P16474	682 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	HSP60	P19882	572 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	VMA4	P22203	233 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	TRX2	P22803	104 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	VMA3	P25515	160 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	SCD5	P34758	872 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	VPS24	P36095	224 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	YBR184W	P38299	523 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	PAF1	P38351	445 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	MSC7	P38694	644 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	GGA2	P38817	585 aa	Known RBP	4.77	□□□□□ -1.65
PRP3	YDR473C	BUD9	P53226	547 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	RTT10	Q08924	1013 aa		4.77	□□□□□ -1.65
PRP3	YDR473C	THS1	P04801	734 aa	Known RBP	4.76	□□□□□ -1.65
PRP3	YDR473C	CAN1	P04817	590 aa		4.76	□□□□□ -1.65
PRP3	YDR473C	RPL8A	P17076	256 aa	Known RBP	4.76	□□□□□ -1.65
PRP3	YDR473C	MCM5	P29496	775 aa	Known RBP	4.76	□□□□□ -1.65
PRP3	YDR473C	FIR1	P40020	876 aa		4.76	□□□□□ -1.65
PRP3	YDR473C	PEX8	P53248	589 aa		4.76	□□□□□ -1.65
PRP3	YDR473C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
PRP3	YDR473C	VMS1	Q04311	632 aa	Known RBP	4.76	□□□□□ -1.65
PRP3	YDR473C	SPO20	Q04359	397 aa		4.76	□□□□□ -1.65
PRP3	YDR473C	NTG2	Q08214	380 aa		4.76	□□□□□ -1.65
PRP3	YDR473C	RPS31	P05759	152 aa	Known RBP	4.75	□□□□□ -1.65
PRP3	YDR473C	GCR1	P07261	785 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	UGA4	P32837	571 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	LDH1	P38139	375 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	AIM21	P40563	679 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	HLJ1	P48353	224 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	YPL109C	Q02981	657 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	NHA1	Q99271	985 aa		4.75	□□□□□ -1.65
PRP3	YDR473C	CIT1	P00890	479 aa		4.74	□□□□□ -1.65
PRP3	YDR473C	LEU1	P07264	779 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 277.7 ms