RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	TRS120	Q04183	1289 aa		3.65	□□□□□ -1.83
CSN9	YDR179C	BSC2	Q05611	235 aa		3.65	□□□□□ -1.83
CSN9	YDR179C	PMT7	Q06644	662 aa		3.65	□□□□□ -1.83
CSN9	YDR179C	CMR1	Q12510	522 aa	Known RBP	3.65	□□□□□ -1.83
CSN9	YDR179C	YHL008C	P38750	627 aa		3.64	□□□□□ -1.83
CSN9	YDR179C	UTP22	P53254	1237 aa	Predicted RBP	3.64	□□□□□ -1.83
CSN9	YDR179C	RCM1	P53972	490 aa		3.64	□□□□□ -1.83
CSN9	YDR179C	CDC55	Q00362	526 aa		3.64	□□□□□ -1.83
CSN9	YDR179C	THI80	P35202	319 aa		3.63	□□□□□ -1.83
CSN9	YDR179C	SHU2	P38957	223 aa		3.63	□□□□□ -1.83
CSN9	YDR179C	SAP155	P43612	1002 aa		3.63	□□□□□ -1.83
CSN9	YDR179C	PRP43	P53131	767 aa	Known RBP	3.63	□□□□□ -1.83
CSN9	YDR179C	HDA2	Q06629	674 aa		3.63	□□□□□ -1.83
CSN9	YDR179C	FLP1	P03870	423 aa		3.62	□□□□□ -1.83
CSN9	YDR179C	GCD1	P09032	578 aa	Predicted RBP	3.62	□□□□□ -1.83
CSN9	YDR179C	WHI3	P34761	661 aa	Known RBP	3.62	□□□□□ -1.83
CSN9	YDR179C	POL12	P38121	705 aa	Predicted RBP	3.62	□□□□□ -1.83
CSN9	YDR179C	REI1	P38344	393 aa	Predicted RBP	3.62	□□□□□ -1.83
CSN9	YDR179C	RVS167	P39743	482 aa	Known RBP	3.62	□□□□□ -1.83
CSN9	YDR179C	DFG16	Q99234	619 aa		3.62	□□□□□ -1.83
CSN9	YDR179C	COB	P00163	385 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	RPS4A	P0CX35	261 aa	Known RBP	3.61	□□□□□ -1.83
CSN9	YDR179C	RPS4B	P0CX36	261 aa	Known RBP	3.61	□□□□□ -1.83
CSN9	YDR179C	ADP1	P25371	1049 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	CDC3	P32457	520 aa	Known RBP	3.61	□□□□□ -1.83
CSN9	YDR179C	NNK1	P36003	928 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	ALT1	P52893	592 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	NUT1	P53114	1132 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	CDA2	Q06703	312 aa		3.61	□□□□□ -1.83
CSN9	YDR179C	SMY2	P32909	740 aa	Known RBP	3.6	□□□□□ -1.83
CSN9	YDR179C	TSA1	P34760	196 aa	Known RBP	3.6	□□□□□ -1.83
CSN9	YDR179C	YKL077W	P36081	392 aa		3.6	□□□□□ -1.83
CSN9	YDR179C	MSH4	P40965	878 aa	Predicted RBP	3.6	□□□□□ -1.83
CSN9	YDR179C	OYE3	P41816	400 aa	Predicted RBP	3.6	□□□□□ -1.83
CSN9	YDR179C	SAM37	P50110	327 aa		3.6	□□□□□ -1.83
CSN9	YDR179C	YAF9	P53930	226 aa		3.6	□□□□□ -1.83
CSN9	YDR179C	ORC3	P54790	616 aa		3.6	□□□□□ -1.83
CSN9	YDR179C	AVO1	Q08236	1176 aa		3.6	□□□□□ -1.83
CSN9	YDR179C	TRL1	P09880	827 aa	Known RBP	3.59	□□□□□ -1.83
CSN9	YDR179C	MCM5	P29496	775 aa	Known RBP	3.59	□□□□□ -1.83
CSN9	YDR179C	CIC1	P38779	376 aa	Known RBP	3.59	□□□□□ -1.83
CSN9	YDR179C	NOC3	Q07896	663 aa	Predicted RBP	3.59	□□□□□ -1.83
CSN9	YDR179C	TRE1	Q08919	783 aa		3.59	□□□□□ -1.83
CSN9	YDR179C	MNL2	Q12205	849 aa		3.59	□□□□□ -1.83
CSN9	YDR179C	GAS1	P22146	559 aa	Known RBP	3.58	□□□□□ -1.84
CSN9	YDR179C	NFS1	P25374	497 aa		3.58	□□□□□ -1.84
CSN9	YDR179C	DUR3	P33413	735 aa		3.58	□□□□□ -1.84
CSN9	YDR179C	HSP78	P33416	811 aa		3.58	□□□□□ -1.84
CSN9	YDR179C	INP54	Q08227	384 aa	Known RBP	3.58	□□□□□ -1.84
CSN9	YDR179C	YVC1	Q12324	675 aa		3.58	□□□□□ -1.84
CSN9	YDR179C	GRS1	P38088	690 aa	Known RBP	3.57	□□□□□ -1.84
CSN9	YDR179C	FLR1	P38124	548 aa		3.57	□□□□□ -1.84
CSN9	YDR179C	HSE1	P38753	452 aa		3.57	□□□□□ -1.84
CSN9	YDR179C	GEF1	P37020	779 aa		3.56	□□□□□ -1.84
CSN9	YDR179C	ATG14	P38270	344 aa		3.56	□□□□□ -1.84
CSN9	YDR179C	MTR4	P47047	1073 aa	Known RBP	3.56	□□□□□ -1.84
CSN9	YDR179C	YGR045C	P53229	120 aa		3.56	□□□□□ -1.84
CSN9	YDR179C	YCS4	Q06156	1176 aa		3.56	□□□□□ -1.84
CSN9	YDR179C	ALG6	Q12001	544 aa	Known RBP	3.56	□□□□□ -1.84
CSN9	YDR179C	KAR2	P16474	682 aa	Known RBP	3.55	□□□□□ -1.84
CSN9	YDR179C	PRO1	P32264	428 aa		3.55	□□□□□ -1.84
CSN9	YDR179C	GCD6	P32501	712 aa	Known RBP	3.55	□□□□□ -1.84
CSN9	YDR179C	ERP5	P38819	212 aa		3.55	□□□□□ -1.84
CSN9	YDR179C	MDJ2	P42834	146 aa		3.55	□□□□□ -1.84
CSN9	YDR179C	ELA1	P53861	379 aa	Predicted RBP	3.55	□□□□□ -1.84
CSN9	YDR179C	NOG1	Q02892	647 aa	Known RBP	3.55	□□□□□ -1.84
CSN9	YDR179C	HRK1	Q08732	759 aa	Known RBP	3.55	□□□□□ -1.84
CSN9	YDR179C	LAP2	Q10740	671 aa		3.55	□□□□□ -1.84
CSN9	YDR179C	YBL113C	Q7M4S9	792 aa		3.55	□□□□□ -1.84
CSN9	YDR179C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-DR6	P0CX70	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-ER1	P0CX71	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-LR2	P0CX72	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-PL	P0CX73	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-JR1	P0CX74	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-LR3	P0CX75	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-ML2	P0CX76	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	EXO5	P38289	585 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	PEX7	P39108	375 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	YAR028W	P39548	234 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	FOL2	P51601	243 aa	Known RBP	3.54	□□□□□ -1.84
CSN9	YDR179C	SSY1	Q03770	852 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	NUT2	Q06213	157 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	PUS7	Q08647	676 aa	Known RBP	3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-GR1	Q12085	440 aa		3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.54	□□□□□ -1.84
CSN9	YDR179C	TY1A-OL	Q92392	440 aa	Known RBP	3.54	□□□□□ -1.84
CSN9	YDR179C	VMA4	P22203	233 aa	Known RBP	3.53	□□□□□ -1.84
CSN9	YDR179C	VPS35	P34110	944 aa		3.53	□□□□□ -1.84
CSN9	YDR179C	MON1	P53129	644 aa		3.53	□□□□□ -1.84
CSN9	YDR179C	TPP1	Q03796	238 aa		3.53	□□□□□ -1.84
CSN9	YDR179C	HAT1	Q12341	374 aa		3.53	□□□□□ -1.84
CSN9	YDR179C	MDL2	P33311	773 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	YHL012W	P38709	493 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	PTC7	P38797	343 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	ENV11	P53246	860 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	EAR1	Q03212	550 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	LPX1	Q12405	387 aa	Known RBP	3.52	□□□□□ -1.85
CSN9	YDR179C	FRT1	Q99332	602 aa		3.52	□□□□□ -1.85
CSN9	YDR179C	PRP6	P19735	899 aa	Predicted RBP	3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms