RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C HTS1P07263 546 aaKnown RBP5.67□□□□□ -1.5
RUB1YDR139C MCM2P29469 868 aa5.67□□□□□ -1.5
RUB1YDR139C POL5P39985 1022 aaKnown RBP5.67□□□□□ -1.5
RUB1YDR139C FYV10P40492 516 aa5.67□□□□□ -1.5
RUB1YDR139C SNU71P53207 620 aaKnown RBP5.67□□□□□ -1.5
RUB1YDR139C DSE4P53753 1117 aa5.67□□□□□ -1.5
RUB1YDR139C GAS5Q08193 484 aa5.67□□□□□ -1.5
RUB1YDR139C UGA4P32837 571 aa5.66□□□□□ -1.5
RUB1YDR139C RPS26AP39938 119 aaKnown RBP5.66□□□□□ -1.5
RUB1YDR139C RPS26BP39939 119 aaKnown RBP5.66□□□□□ -1.5
RUB1YDR139C YPL109CQ02981 657 aa5.66□□□□□ -1.5
RUB1YDR139C YIG1Q08956 461 aa5.66□□□□□ -1.5
RUB1YDR139C ELG1Q12050 791 aa5.66□□□□□ -1.5
RUB1YDR139C SQT1P35184 431 aa5.65□□□□□ -1.5
RUB1YDR139C MRPS18P42847 217 aa5.65□□□□□ -1.5
RUB1YDR139C RSM26P47141 266 aa5.65□□□□□ -1.5
RUB1YDR139C UTP22P53254 1237 aaPredicted RBP5.65□□□□□ -1.5
RUB1YDR139C FAR11P53917 953 aa5.65□□□□□ -1.5
RUB1YDR139C ADI1Q03677 179 aa5.65□□□□□ -1.5
RUB1YDR139C MCD1Q12158 566 aa5.65□□□□□ -1.5
RUB1YDR139C RAD2P07276 1031 aa5.64□□□□□ -1.51
RUB1YDR139C CYC8P14922 966 aa5.64□□□□□ -1.51
RUB1YDR139C MAE1P36013 669 aaKnown RBP5.64□□□□□ -1.51
RUB1YDR139C YKL077WP36081 392 aa5.64□□□□□ -1.51
RUB1YDR139C GCV1P48015 400 aa5.64□□□□□ -1.51
RUB1YDR139C BUD9P53226 547 aa5.64□□□□□ -1.51
RUB1YDR139C NOG1Q02892 647 aaKnown RBP5.64□□□□□ -1.51
RUB1YDR139C SPR28Q04921 423 aa5.64□□□□□ -1.51
RUB1YDR139C ESF1Q06344 628 aaKnown RBP5.64□□□□□ -1.51
RUB1YDR139C PRE9P23638 258 aaKnown RBP5.63□□□□□ -1.51
RUB1YDR139C SFA1P32771 386 aa5.63□□□□□ -1.51
RUB1YDR139C OMA1P36163 345 aa5.63□□□□□ -1.51
RUB1YDR139C RMD1Q03441 430 aa5.63□□□□□ -1.51
RUB1YDR139C YMR074CQ04773 145 aa5.63□□□□□ -1.51
RUB1YDR139C YLL054CQ12244 843 aa5.63□□□□□ -1.51
RUB1YDR139C AI3P03877 415 aa5.62□□□□□ -1.51
RUB1YDR139C PEP7P32609 515 aa5.62□□□□□ -1.51
RUB1YDR139C EXO5P38289 585 aa5.62□□□□□ -1.51
RUB1YDR139C PEX28P38848 579 aa5.62□□□□□ -1.51
RUB1YDR139C PEX13P80667 386 aa5.62□□□□□ -1.51
RUB1YDR139C TY1A-NL1Q12391 440 aaKnown RBP5.62□□□□□ -1.51
RUB1YDR139C TY1A-LR4P0C2I8 440 aaKnown RBP5.61□□□□□ -1.51
RUB1YDR139C TY1A-DR6P0CX70 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-ER1P0CX71 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-LR2P0CX72 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-PLP0CX73 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-JR1P0CX74 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-LR3P0CX75 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-ML2P0CX76 440 aa5.61□□□□□ -1.51
RUB1YDR139C ERS1P17261 260 aa5.61□□□□□ -1.51
RUB1YDR139C MSH3P25336 1018 aa5.61□□□□□ -1.51
RUB1YDR139C ARL1P38116 183 aaKnown RBP5.61□□□□□ -1.51
RUB1YDR139C INP52P50942 1183 aa5.61□□□□□ -1.51
RUB1YDR139C MEC3Q02574 474 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-GR1Q12085 440 aa5.61□□□□□ -1.51
RUB1YDR139C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.61□□□□□ -1.51
RUB1YDR139C TY1A-OLQ92392 440 aaKnown RBP5.61□□□□□ -1.51
RUB1YDR139C RSC6P25632 483 aa5.6□□□□□ -1.51
RUB1YDR139C MTR4P47047 1073 aaKnown RBP5.6□□□□□ -1.51
RUB1YDR139C SVF1Q05515 481 aa5.6□□□□□ -1.51
RUB1YDR139C NAP1P25293 417 aaKnown RBP5.59□□□□□ -1.51
RUB1YDR139C REI1P38344 393 aaPredicted RBP5.59□□□□□ -1.51
RUB1YDR139C PIC2P40035 300 aa5.59□□□□□ -1.51
RUB1YDR139C KIP3P53086 805 aaKnown RBP5.59□□□□□ -1.51
RUB1YDR139C YOR223WQ12015 292 aa5.59□□□□□ -1.51
RUB1YDR139C VMA4P22203 233 aaKnown RBP5.58□□□□□ -1.52
RUB1YDR139C ARI1P53111 347 aaKnown RBP5.58□□□□□ -1.52
RUB1YDR139C YGL140CP53120 1219 aa5.58□□□□□ -1.52
RUB1YDR139C TAF13P11747 167 aa5.57□□□□□ -1.52
RUB1YDR139C SEC23P15303 768 aaKnown RBP5.57□□□□□ -1.52
RUB1YDR139C NEM1P38757 446 aa5.57□□□□□ -1.52
RUB1YDR139C SLS1P42900 643 aa5.57□□□□□ -1.52
RUB1YDR139C NCE103P53615 221 aa5.57□□□□□ -1.52
RUB1YDR139C PAM1P37304 830 aaKnown RBP5.56□□□□□ -1.52
RUB1YDR139C NOP7P53261 605 aaKnown RBP5.56□□□□□ -1.52
RUB1YDR139C UTP5Q04177 643 aaKnown RBP5.56□□□□□ -1.52
RUB1YDR139C REC8Q12188 680 aa5.56□□□□□ -1.52
RUB1YDR139C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
RUB1YDR139C PET112P33893 541 aa5.55□□□□□ -1.52
RUB1YDR139C RDH54P38086 958 aa5.55□□□□□ -1.52
RUB1YDR139C ATG14P38270 344 aa5.55□□□□□ -1.52
RUB1YDR139C XKS1P42826 600 aa5.55□□□□□ -1.52
RUB1YDR139C DOT1Q04089 582 aaKnown RBP5.55□□□□□ -1.52
RUB1YDR139C AVO1Q08236 1176 aa5.55□□□□□ -1.52
RUB1YDR139C ALG6Q12001 544 aaKnown RBP5.55□□□□□ -1.52
RUB1YDR139C MNR2P35724 969 aa5.54□□□□□ -1.52
RUB1YDR139C AVT1P47082 602 aa5.54□□□□□ -1.52
RUB1YDR139C TRP3P00937 484 aa5.53□□□□□ -1.52
RUB1YDR139C HEM13P11353 328 aaKnown RBP5.53□□□□□ -1.52
RUB1YDR139C ADD66P36040 267 aa5.53□□□□□ -1.52
RUB1YDR139C YGR045CP53229 120 aa5.53□□□□□ -1.52
RUB1YDR139C JIP5Q06214 492 aaPredicted RBP5.53□□□□□ -1.52
RUB1YDR139C MRL1Q06815 381 aa5.53□□□□□ -1.52
RUB1YDR139C COQ2P32378 372 aa5.52□□□□□ -1.53
RUB1YDR139C AKR1P39010 764 aa5.52□□□□□ -1.53
RUB1YDR139C YAR028WP39548 234 aa5.52□□□□□ -1.53
RUB1YDR139C SPO74P45819 413 aa5.52□□□□□ -1.53
RUB1YDR139C ELA1P53861 379 aaPredicted RBP5.52□□□□□ -1.53
RUB1YDR139C RKM2Q03942 479 aa5.52□□□□□ -1.53
RUB1YDR139C EST2Q06163 884 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms