RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SEC23P15303 768 aaKnown RBP6.02□□□□□ -1.45
TRM1YDR120C KNS1P32350 737 aaPredicted RBP6.02□□□□□ -1.45
TRM1YDR120C XKS1P42826 600 aa6.02□□□□□ -1.45
TRM1YDR120C CWC24P53769 259 aa6.02□□□□□ -1.45
TRM1YDR120C AIM44Q99299 758 aa6.02□□□□□ -1.45
TRM1YDR120C YTA7P40340 1379 aa6.01□□□□□ -1.45
TRM1YDR120C EXO5P38289 585 aa6.01□□□□□ -1.45
TRM1YDR120C LEM3P42838 414 aa6.01□□□□□ -1.45
TRM1YDR120C HAS1Q03532 505 aaKnown RBP6.01□□□□□ -1.45
TRM1YDR120C RTT10Q08924 1013 aa6.01□□□□□ -1.45
TRM1YDR120C SSF2Q12153 453 aaPredicted RBP6.01□□□□□ -1.45
TRM1YDR120C HEM13P11353 328 aaKnown RBP6□□□□□ -1.45
TRM1YDR120C NEO1P40527 1151 aa6□□□□□ -1.45
TRM1YDR120C FAA4P47912 694 aaKnown RBP6□□□□□ -1.45
TRM1YDR120C GNP1P48813 663 aa6□□□□□ -1.45
TRM1YDR120C GDE1Q02979 1223 aa6□□□□□ -1.45
TRM1YDR120C MRL1Q06815 381 aa6□□□□□ -1.45
TRM1YDR120C TAF13P11747 167 aa5.99□□□□□ -1.45
TRM1YDR120C RDH54P38086 958 aa5.99□□□□□ -1.45
TRM1YDR120C JJJ3P47138 172 aa5.99□□□□□ -1.45
TRM1YDR120C YGR053CP53234 283 aa5.99□□□□□ -1.45
TRM1YDR120C SOK2P53438 785 aaPredicted RBP5.99□□□□□ -1.45
TRM1YDR120C TY1A-LR4P0C2I8 440 aaKnown RBP5.99□□□□□ -1.45
TRM1YDR120C TY1A-DR6P0CX70 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-ER1P0CX71 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-LR2P0CX72 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-PLP0CX73 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-JR1P0CX74 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-LR3P0CX75 440 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-ML2P0CX76 440 aa5.99□□□□□ -1.45
TRM1YDR120C NAR1P23503 491 aaKnown RBP5.99□□□□□ -1.45
TRM1YDR120C YKL077WP36081 392 aa5.99□□□□□ -1.45
TRM1YDR120C GIS4Q04233 774 aa5.99□□□□□ -1.45
TRM1YDR120C HDA2Q06629 674 aa5.99□□□□□ -1.45
TRM1YDR120C YIG1Q08956 461 aa5.99□□□□□ -1.45
TRM1YDR120C TY1A-GR1Q12085 440 aa5.99□□□□□ -1.45
TRM1YDR120C WRS1Q12109 432 aaKnown RBP5.99□□□□□ -1.45
TRM1YDR120C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.99□□□□□ -1.45
TRM1YDR120C TY1A-OLQ92392 440 aaKnown RBP5.99□□□□□ -1.45
TRM1YDR120C VMA4P22203 233 aaKnown RBP5.98□□□□□ -1.45
TRM1YDR120C GIP2P40036 548 aa5.98□□□□□ -1.45
TRM1YDR120C TMA46Q12000 345 aaKnown RBP5.98□□□□□ -1.45
TRM1YDR120C SLP1Q12232 587 aa5.98□□□□□ -1.45
TRM1YDR120C UTP22P53254 1237 aaPredicted RBP5.97□□□□□ -1.45
TRM1YDR120C HPF1Q05164 967 aa5.97□□□□□ -1.45
TRM1YDR120C PAN5P38787 379 aa5.96□□□□□ -1.45
TRM1YDR120C HXT13P39924 564 aa5.96□□□□□ -1.45
TRM1YDR120C HXT17P53631 564 aa5.96□□□□□ -1.45
TRM1YDR120C HXT15P54854 567 aa5.96□□□□□ -1.45
TRM1YDR120C EEB1Q02891 456 aa5.96□□□□□ -1.45
TRM1YDR120C REC8Q12188 680 aa5.96□□□□□ -1.45
TRM1YDR120C DPH6Q12429 685 aa5.96□□□□□ -1.45
TRM1YDR120C YOL098CQ12496 1037 aa5.96□□□□□ -1.45
TRM1YDR120C RAD27P26793 382 aa5.96□□□□□ -1.46
TRM1YDR120C PGM2P37012 569 aaKnown RBP5.96□□□□□ -1.46
TRM1YDR120C ALG14P38242 237 aa5.96□□□□□ -1.46
TRM1YDR120C SIW14P53965 281 aa5.96□□□□□ -1.46
TRM1YDR120C SPO71Q03868 1245 aa5.96□□□□□ -1.46
TRM1YDR120C ECM5Q03214 1411 aa5.95□□□□□ -1.46
TRM1YDR120C NEM1P38757 446 aa5.95□□□□□ -1.46
TRM1YDR120C TED1P40533 473 aa5.95□□□□□ -1.46
TRM1YDR120C ENT3P47160 408 aa5.95□□□□□ -1.46
TRM1YDR120C POL5P39985 1022 aaKnown RBP5.94□□□□□ -1.46
TRM1YDR120C YJL049WP47048 450 aa5.94□□□□□ -1.46
TRM1YDR120C GCV1P48015 400 aa5.94□□□□□ -1.46
TRM1YDR120C OPI10Q08202 246 aa5.94□□□□□ -1.46
TRM1YDR120C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46 RIP-Chip
TRM1YDR120C PRI2P20457 528 aa5.94□□□□□ -1.46
TRM1YDR120C GBP2P25555 427 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
TRM1YDR120C ARL1P38116 183 aaKnown RBP5.94□□□□□ -1.46
TRM1YDR120C SLS1P42900 643 aa5.94□□□□□ -1.46
TRM1YDR120C UTP5Q04177 643 aaKnown RBP5.94□□□□□ -1.46
TRM1YDR120C MTR4P47047 1073 aaKnown RBP5.93□□□□□ -1.46
TRM1YDR120C MEC3Q02574 474 aa5.93□□□□□ -1.46
TRM1YDR120C ROD1Q02805 837 aa5.93□□□□□ -1.46
TRM1YDR120C TY4B-PA0A0B7P3V8 1104 aa5.92□□□□□ -1.46
TRM1YDR120C RER2P35196 286 aa5.92□□□□□ -1.46
TRM1YDR120C TAT2P38967 592 aa5.92□□□□□ -1.46
TRM1YDR120C IOC3P43596 787 aa5.92□□□□□ -1.46
TRM1YDR120C YGR035CP53222 116 aa5.92□□□□□ -1.46
TRM1YDR120C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
TRM1YDR120C FAL1Q12099 399 aaKnown RBP5.92□□□□□ -1.46
TRM1YDR120C TY4A-HQ6Q5P6 413 aa5.92□□□□□ -1.46
TRM1YDR120C NHA1Q99271 985 aa5.92□□□□□ -1.46
TRM1YDR120C TRP2P00899 507 aaKnown RBP5.91□□□□□ -1.46
TRM1YDR120C SAC7P17121 654 aa5.91□□□□□ -1.46
TRM1YDR120C GRX1P25373 110 aaKnown RBP5.91□□□□□ -1.46
TRM1YDR120C YKL069WP36088 180 aa5.91□□□□□ -1.46
TRM1YDR120C EST2Q06163 884 aa5.91□□□□□ -1.46
TRM1YDR120C BUD4P47136 1447 aa5.91□□□□□ -1.46
TRM1YDR120C MKK2P32491 506 aa5.91□□□□□ -1.46
TRM1YDR120C ADD66P36040 267 aa5.91□□□□□ -1.46
TRM1YDR120C SPF1P39986 1215 aaKnown RBP5.91□□□□□ -1.46
TRM1YDR120C TYW3P53177 273 aa5.91□□□□□ -1.46
TRM1YDR120C FPR4Q06205 392 aaPredicted RBP5.91□□□□□ -1.46
TRM1YDR120C ELG1Q12050 791 aa5.91□□□□□ -1.46
TRM1YDR120C HIR3P47171 1648 aa5.9□□□□□ -1.46
TRM1YDR120C DED1P06634 604 aaKnown RBP5.9□□□□□ -1.47
TRM1YDR120C ERS1P17261 260 aa5.9□□□□□ -1.47
TRM1YDR120C BAS1P22035 811 aa5.9□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms