RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A NTO1Q12311 748 aa2.66□□□□□ -1.98
TFB5YDR079C-A TRS33Q99394 268 aa2.66□□□□□ -1.98
TFB5YDR079C-A SMY2P32909 740 aaKnown RBP2.65□□□□□ -1.99
TFB5YDR079C-A KTR7P40504 517 aa2.65□□□□□ -1.99
TFB5YDR079C-A GCN5Q03330 439 aa2.65□□□□□ -1.99
TFB5YDR079C-A URN1Q06525 465 aaKnown RBP2.65□□□□□ -1.99
TFB5YDR079C-A FIR1P40020 876 aa2.64□□□□□ -1.99
TFB5YDR079C-A RGD2P43556 714 aa2.64□□□□□ -1.99
TFB5YDR079C-A PPM2Q08282 695 aa2.64□□□□□ -1.99
TFB5YDR079C-A LGE1Q02796 332 aaKnown RBP2.63□□□□□ -1.99
TFB5YDR079C-A ISC10P32645 267 aa2.62□□□□□ -1.99
TFB5YDR079C-A MEF2P39677 819 aa2.62□□□□□ -1.99
TFB5YDR079C-A ALG6Q12001 544 aaKnown RBP2.62□□□□□ -1.99
TFB5YDR079C-A HXT8P40886 569 aa2.61□□□□□ -1.99
TFB5YDR079C-A MEC3Q02574 474 aa2.61□□□□□ -1.99
TFB5YDR079C-A GAL2P13181 574 aa2.6□□□□□ -1.99
TFB5YDR079C-A SAM35P14693 329 aa2.6□□□□□ -1.99
TFB5YDR079C-A STE11P23561 717 aa2.6□□□□□ -1.99
TFB5YDR079C-A PYC2P32327 1180 aaKnown RBP2.6□□□□□ -1.99
TFB5YDR079C-A NNK1P36003 928 aa2.6□□□□□ -1.99
TFB5YDR079C-A LAM1P38851 1228 aa2.6□□□□□ -1.99
TFB5YDR079C-A IOC3P43596 787 aa2.6□□□□□ -1.99
TFB5YDR079C-A SGD1Q06132 899 aa2.6□□□□□ -1.99
TFB5YDR079C-A DOM34P33309 386 aa2.59□□□□□ -1.99
TFB5YDR079C-A NTA1P40354 457 aa2.59□□□□□ -1.99
TFB5YDR079C-A MNN10P50108 393 aaKnown RBP2.59□□□□□ -1.99
TFB5YDR079C-A KIN4Q01919 800 aa2.59□□□□□ -1.99
TFB5YDR079C-A PUS7Q08647 676 aaKnown RBP2.59□□□□□ -1.99
TFB5YDR079C-A HTS1P07263 546 aaKnown RBP2.58□□□□□ -2
TFB5YDR079C-A OAR1P35731 278 aa2.58□□□□□ -2
TFB5YDR079C-A CUE2P36075 443 aaKnown RBP2.58□□□□□ -2
TFB5YDR079C-A REI1P38344 393 aaPredicted RBP2.58□□□□□ -2
TFB5YDR079C-A DMA1P38823 416 aa2.58□□□□□ -2
TFB5YDR079C-A ELA1P53861 379 aaPredicted RBP2.58□□□□□ -2
TFB5YDR079C-A MOH1P38191 138 aa2.57□□□□□ -2
TFB5YDR079C-A PHO23P50947 330 aa2.57□□□□□ -2
TFB5YDR079C-A MCM6P53091 1017 aaKnown RBP2.57□□□□□ -2
TFB5YDR079C-A TMA10Q06177 86 aa2.57□□□□□ -2
TFB5YDR079C-A YOR352WQ08816 343 aa2.57□□□□□ -2
TFB5YDR079C-A PUF4P25339 888 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
TFB5YDR079C-A RTG2P32608 588 aaKnown RBP2.56□□□□□ -2
TFB5YDR079C-A KTR2P33550 425 aa2.56□□□□□ -2
TFB5YDR079C-A LST4P34239 828 aa2.56□□□□□ -2
TFB5YDR079C-A YHL012WP38709 493 aa2.56□□□□□ -2
TFB5YDR079C-A YJL007CP47080 104 aa2.56□□□□□ -2
TFB5YDR079C-A YGR045CP53229 120 aa2.56□□□□□ -2
TFB5YDR079C-A ENV11P53246 860 aa2.56□□□□□ -2
TFB5YDR079C-A TPP1Q03796 238 aa2.56□□□□□ -2
TFB5YDR079C-A DUS4Q06063 367 aa2.56□□□□□ -2
TFB5YDR079C-A TIF6Q12522 245 aaKnown RBP2.56□□□□□ -2
TFB5YDR079C-A AIM26P32858 118 aa2.55□□□□□ -2
TFB5YDR079C-A MDL2P33311 773 aa2.55□□□□□ -2
TFB5YDR079C-A ALD4P46367 519 aaKnown RBP2.55□□□□□ -2
TFB5YDR079C-A DEF1P35732 738 aaKnown RBP2.54□□□□□ -2
TFB5YDR079C-A MSS4P38994 779 aa2.54□□□□□ -2
TFB5YDR079C-A UBA2P52488 636 aa2.54□□□□□ -2
TFB5YDR079C-A PMA1P05030 918 aaKnown RBP2.53□□□□□ -2
TFB5YDR079C-A TIF1P10081 395 aaKnown RBP2.53□□□□□ -2
TFB5YDR079C-A PSY2P40164 858 aa2.53□□□□□ -2
TFB5YDR079C-A UTP22P53254 1237 aaPredicted RBP2.53□□□□□ -2
TFB5YDR079C-A CDC20P26309 610 aa2.52□□□□□ -2.01
TFB5YDR079C-A IRS4P36115 615 aaKnown RBP2.52□□□□□ -2.01
TFB5YDR079C-A RAD55P38953 406 aa2.52□□□□□ -2.01
TFB5YDR079C-A RIM11P38615 370 aa2.51□□□□□ -2.01
TFB5YDR079C-A QRI1P43123 477 aaKnown RBP2.51□□□□□ -2.01
TFB5YDR079C-A AVO1Q08236 1176 aa2.51□□□□□ -2.01
TFB5YDR079C-A CMR1Q12510 522 aaKnown RBP2.51□□□□□ -2.01
TFB5YDR079C-A NPR1P22211 790 aa2.5□□□□□ -2.01
TFB5YDR079C-A SRO9P25567 434 aaKnown RBP2.5□□□□□ -2.01
TFB5YDR079C-A ROT1Q03691 256 aa2.5□□□□□ -2.01
TFB5YDR079C-A CYC1P00044 109 aaPredicted RBP2.49□□□□□ -2.01
TFB5YDR079C-A SRS2P12954 1174 aa2.49□□□□□ -2.01
TFB5YDR079C-A PRP5P21372 849 aaPredicted RBP2.49□□□□□ -2.01
TFB5YDR079C-A SIS2P36024 562 aa2.49□□□□□ -2.01
TFB5YDR079C-A ATG32P40458 529 aa2.49□□□□□ -2.01
TFB5YDR079C-A CTR9P89105 1077 aa2.49□□□□□ -2.01
TFB5YDR079C-A PLB2Q03674 706 aa2.49□□□□□ -2.01
TFB5YDR079C-A ACK1Q07622 623 aaPredicted RBP2.49□□□□□ -2.01
TFB5YDR079C-A YAP7Q08182 245 aa2.49□□□□□ -2.01
TFB5YDR079C-A AFT2Q08957 416 aa2.49□□□□□ -2.01
TFB5YDR079C-A ICT1Q12385 394 aa2.49□□□□□ -2.01
TFB5YDR079C-A SPS1P08458 490 aa2.48□□□□□ -2.01
TFB5YDR079C-A DCG1P32460 244 aa2.48□□□□□ -2.01
TFB5YDR079C-A HNT2P49775 206 aa2.48□□□□□ -2.01
TFB5YDR079C-A SUT1P53032 299 aaKnown RBP2.48□□□□□ -2.01
TFB5YDR079C-A COBP00163 385 aa2.47□□□□□ -2.01
TFB5YDR079C-A ARL1P38116 183 aaKnown RBP2.47□□□□□ -2.01
TFB5YDR079C-A NMD3P38861 518 aaKnown RBP2.47□□□□□ -2.01
TFB5YDR079C-A APC11Q12157 165 aa2.47□□□□□ -2.01
TFB5YDR079C-A CDC6P09119 513 aa2.46□□□□□ -2.02
TFB5YDR079C-A BIM1P40013 344 aa2.46□□□□□ -2.02
TFB5YDR079C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
TFB5YDR079C-A RXT3Q07458 294 aa2.46□□□□□ -2.02
TFB5YDR079C-A RSC58Q07979 502 aa2.46□□□□□ -2.02
TFB5YDR079C-A NDJ1Q12366 352 aa2.46□□□□□ -2.02
TFB5YDR079C-A TY1A-LR4P0C2I8 440 aaKnown RBP2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-DR6P0CX70 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-ER1P0CX71 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-LR2P0CX72 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-PLP0CX73 440 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms