RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	AKL1	P38080	1108 aa	Known RBP	5.77	□□□□□ -1.49
RPN6	YDL097C	VPS70	P47161	811 aa		5.77	□□□□□ -1.49
RPN6	YDL097C	DNM1	P54861	757 aa		5.77	□□□□□ -1.49
RPN6	YDL097C	PKH1	Q03407	766 aa		5.77	□□□□□ -1.49
RPN6	YDL097C	YPR148C	Q06523	435 aa		5.77	□□□□□ -1.49
RPN6	YDL097C	MGM1	P32266	881 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	ACA1	P39970	489 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	FOL2	P51601	243 aa	Known RBP	5.76	□□□□□ -1.49
RPN6	YDL097C	YDR090C	Q03193	310 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	RAD59	Q12223	238 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	YDR524C-B	Q3E6R4	66 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	FMP27	Q06179	2628 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	IRA2	P19158	3079 aa		5.76	□□□□□ -1.49
RPN6	YDL097C	PMA1	P05030	918 aa	Known RBP	5.75	□□□□□ -1.49
RPN6	YDL097C	CDC4	P07834	779 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	HEM1	P09950	548 aa	Predicted RBP	5.75	□□□□□ -1.49
RPN6	YDL097C	KAR2	P16474	682 aa	Known RBP	5.75	□□□□□ -1.49
RPN6	YDL097C	MET22	P32179	357 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	JJJ2	P46997	583 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	IRC4	Q03036	179 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	CSC1	Q06538	782 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	THI3	Q07471	609 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	TFB4	Q12004	338 aa		5.75	□□□□□ -1.49
RPN6	YDL097C	MLP1	Q02455	1875 aa	Known RBP	5.75	□□□□□ -1.49
RPN6	YDL097C	DIT2	P21595	489 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	LCB1	P25045	558 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	WRS1	Q12109	432 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	UTP20	P35194	2493 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-DR4	O74302	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-H	P0C2I4	478 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-A	P0CX57	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-PR1	P0CX58	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-OR	P0CX59	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-PR2	P0CX60	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-DR5	P0CX65	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-ER2	P0CX66	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-GR3	P0CX67	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-LR1	P0CX68	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-MR2	P0CX69	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	NGR1	P32831	672 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	BDP1	P46678	594 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-JR2	P47099	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	DMA2	P53924	522 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-DR1	Q03856	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-ML1	Q04706	440 aa	Known RBP	5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-BR	Q12217	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-NL2	Q12470	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	TY1A-GR2	Q12485	440 aa		5.74	□□□□□ -1.49
RPN6	YDL097C	ADP1	P25371	1049 aa		5.73	□□□□□ -1.49
RPN6	YDL097C	UGA3	P26370	528 aa		5.73	□□□□□ -1.49
RPN6	YDL097C	EUG1	P32474	517 aa		5.73	□□□□□ -1.49
RPN6	YDL097C	POL5	P39985	1022 aa	Known RBP	5.73	□□□□□ -1.49
RPN6	YDL097C	RRN7	P40992	514 aa		5.73	□□□□□ -1.49
RPN6	YDL097C	PAP2	P53632	584 aa	Known RBP	5.73	□□□□□ -1.49
RPN6	YDL097C	FCP1	Q03254	732 aa		5.73	□□□□□ -1.49
RPN6	YDL097C	SEC2	P17065	759 aa		5.72	□□□□□ -1.49
RPN6	YDL097C	PKC1	P24583	1151 aa		5.72	□□□□□ -1.49
RPN6	YDL097C	NTH2	P35172	780 aa		5.72	□□□□□ -1.49
RPN6	YDL097C	HXT5	P38695	592 aa		5.72	□□□□□ -1.49
RPN6	YDL097C	PUS6	P53294	404 aa		5.72	□□□□□ -1.49
RPN6	YDL097C	PRP8	P33334	2413 aa	Known RBP	5.71	□□□□□ -1.5
RPN6	YDL097C	RGT1	P32862	1170 aa		5.71	□□□□□ -1.5
RPN6	YDL097C	NSE3	Q05541	303 aa		5.71	□□□□□ -1.5
RPN6	YDL097C	YDR444W	Q04093	687 aa		5.7	□□□□□ -1.5
RPN6	YDL097C	PSF3	Q12146	194 aa		5.7	□□□□□ -1.5
RPN6	YDL097C	SWI1	P09547	1314 aa		5.69	□□□□□ -1.5
RPN6	YDL097C	SPT2	P06843	333 aa	Predicted RBP	5.69	□□□□□ -1.5
RPN6	YDL097C	IDI1	P15496	288 aa		5.69	□□□□□ -1.5
RPN6	YDL097C	MCM3	P24279	971 aa	Known RBP	5.69	□□□□□ -1.5
RPN6	YDL097C	CAD1	P24813	409 aa	Known RBP	5.69	□□□□□ -1.5
RPN6	YDL097C	NOC2	P39744	710 aa	Known RBP	5.69	□□□□□ -1.5
RPN6	YDL097C	RTR1	P40084	226 aa	Predicted RBP	5.69	□□□□□ -1.5
RPN6	YDL097C	HUL4	P40985	892 aa		5.69	□□□□□ -1.5
RPN6	YDL097C	YDR461C-A	Q2V2P7	80 aa		5.69	□□□□□ -1.5
RPN6	YDL097C	VMA2	P16140	517 aa	Known RBP	5.68	□□□□□ -1.5
RPN6	YDL097C	PAT1	P25644	796 aa	Known RBP	5.68	□□□□□ -1.5
RPN6	YDL097C	SKP2	P42843	763 aa		5.68	□□□□□ -1.5
RPN6	YDL097C	ECM16	Q04217	1267 aa	Known RBP	5.68	□□□□□ -1.5
RPN6	YDL097C	TUB2	P02557	457 aa	Known RBP	5.67	□□□□□ -1.5
RPN6	YDL097C	PPZ1	P26570	692 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RPN6	YDL097C	YBL028C	P38202	106 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	FMP10	P40098	244 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	YTA12	P40341	825 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	DUS4	Q06063	367 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	ECM29	P38737	1868 aa		5.67	□□□□□ -1.5
RPN6	YDL097C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RPN6	YDL097C	URK1	P27515	501 aa		5.66	□□□□□ -1.5
RPN6	YDL097C	ORC6	P38826	435 aa		5.66	□□□□□ -1.5
RPN6	YDL097C	HED1	Q03937	162 aa		5.66	□□□□□ -1.5
RPN6	YDL097C	IRC10	Q08118	586 aa		5.66	□□□□□ -1.5
RPN6	YDL097C	SUP35	P05453	685 aa	Known RBP	5.65	□□□□□ -1.51
RPN6	YDL097C	PBS2	P08018	668 aa		5.65	□□□□□ -1.51
RPN6	YDL097C	INP52	P50942	1183 aa		5.65	□□□□□ -1.51
RPN6	YDL097C	YNL115C	P53925	644 aa		5.65	□□□□□ -1.51
RPN6	YDL097C	RMD1	Q03441	430 aa		5.65	□□□□□ -1.51
RPN6	YDL097C	EMI2	Q04409	500 aa	Known RBP	5.65	□□□□□ -1.51
RPN6	YDL097C	UBX5	Q06682	500 aa		5.65	□□□□□ -1.51
RPN6	YDL097C	SUB2	Q07478	446 aa	Known RBP	5.65	□□□□□ -1.51
RPN6	YDL097C	ACC1	Q00955	2233 aa	Known RBP	5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms