RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	SFA1	P32771	386 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	UGA4	P32837	571 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	SEC8	P32855	1065 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	YKL077W	P36081	392 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	RPS26A	P39938	119 aa	Known RBP	3.59	□□□□□ -1.83
YDL041W	YDL041W	RPS26B	P39939	119 aa	Known RBP	3.59	□□□□□ -1.83
YDL041W	YDL041W	POL5	P39985	1022 aa	Known RBP	3.59	□□□□□ -1.83
YDL041W	YDL041W	MRPS18	P42847	217 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	BUD9	P53226	547 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	UTP22	P53254	1237 aa	Predicted RBP	3.59	□□□□□ -1.83
YDL041W	YDL041W	ESF1	Q06344	628 aa	Known RBP	3.59	□□□□□ -1.83
YDL041W	YDL041W	YDR215C	Q12240	137 aa		3.59	□□□□□ -1.83
YDL041W	YDL041W	AI3	P03877	415 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	RAD2	P07276	1031 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	CYC8	P14922	966 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	RSC6	P25632	483 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	MCM2	P29469	868 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	TAT1	P38085	619 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	ATG14	P38270	344 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	PEX13	P80667	386 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	NOG1	Q02892	647 aa	Known RBP	3.58	□□□□□ -1.84
YDL041W	YDL041W	YPL109C	Q02981	657 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	RMD1	Q03441	430 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	ADI1	Q03677	179 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	SPR28	Q04921	423 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	TOS4	Q06266	489 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	SWR1	Q05471	1514 aa		3.58	□□□□□ -1.84
YDL041W	YDL041W	ERS1	P17261	260 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	PRE9	P23638	258 aa	Known RBP	3.57	□□□□□ -1.84
YDL041W	YDL041W	NAP1	P25293	417 aa	Known RBP	3.57	□□□□□ -1.84
YDL041W	YDL041W	MSH3	P25336	1018 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	PEP7	P32609	515 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	PRY1	P47032	299 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	MTR4	P47047	1073 aa	Known RBP	3.57	□□□□□ -1.84
YDL041W	YDL041W	GAS5	Q08193	484 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	YOR223W	Q12015	292 aa		3.57	□□□□□ -1.84
YDL041W	YDL041W	TY1A-NL1	Q12391	440 aa	Known RBP	3.57	□□□□□ -1.84
YDL041W	YDL041W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-DR6	P0CX70	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-ER1	P0CX71	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-LR2	P0CX72	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-PL	P0CX73	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-JR1	P0CX74	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-LR3	P0CX75	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-ML2	P0CX76	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	VMA4	P22203	233 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	YCK2	P23292	546 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	ARL1	P38116	183 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	EXO5	P38289	585 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	REI1	P38344	393 aa	Predicted RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	PEX28	P38848	579 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	SKN7	P38889	622 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	SLN1	P39928	1220 aa	Predicted RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	KIP3	P53086	805 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	ARI1	P53111	347 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	MEC3	Q02574	474 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	SVF1	Q05515	481 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-GR1	Q12085	440 aa		3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	TY1A-OL	Q92392	440 aa	Known RBP	3.56	□□□□□ -1.84
YDL041W	YDL041W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
YDL041W	YDL041W	TAF13	P11747	167 aa		3.55	□□□□□ -1.84
YDL041W	YDL041W	NOP7	P53261	605 aa	Known RBP	3.55	□□□□□ -1.84
YDL041W	YDL041W	SEC23	P15303	768 aa	Known RBP	3.54	□□□□□ -1.84
YDL041W	YDL041W	PET112	P33893	541 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	PIC2	P40035	300 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	XKS1	P42826	600 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	DOT1	Q04089	582 aa	Known RBP	3.54	□□□□□ -1.84
YDL041W	YDL041W	MRL1	Q06815	381 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	AVO1	Q08236	1176 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	REC8	Q12188	680 aa		3.54	□□□□□ -1.84
YDL041W	YDL041W	COQ2	P32378	372 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	HSE1	P38753	452 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	NEM1	P38757	446 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	YGL140C	P53120	1219 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	NCE103	P53615	221 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	UTP5	Q04177	643 aa	Known RBP	3.53	□□□□□ -1.84
YDL041W	YDL041W	MCA1	Q08601	432 aa		3.53	□□□□□ -1.84
YDL041W	YDL041W	ALG6	Q12001	544 aa	Known RBP	3.53	□□□□□ -1.84
YDL041W	YDL041W	CLN2	P20438	545 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	GPT2	P36148	743 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	AKR1	P39010	764 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	YAR028W	P39548	234 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	SLS1	P42900	643 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	CCT8	P47079	568 aa	Known RBP	3.52	□□□□□ -1.85
YDL041W	YDL041W	MTC5	Q03897	1148 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	LAP2	Q10740	671 aa		3.52	□□□□□ -1.85
YDL041W	YDL041W	DED1	P06634	604 aa	Known RBP	3.51	□□□□□ -1.85
YDL041W	YDL041W	RAD27	P26793	382 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	MNR2	P35724	969 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	NNK1	P36003	928 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	ADD66	P36040	267 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	RDH54	P38086	958 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	MAD1	P40957	749 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	LSB3	P43603	459 aa	Known RBP	3.51	□□□□□ -1.85
YDL041W	YDL041W	SPO74	P45819	413 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	ENT3	P47160	408 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	ELA1	P53861	379 aa	Predicted RBP	3.51	□□□□□ -1.85
YDL041W	YDL041W	YPL034W	Q03083	165 aa		3.51	□□□□□ -1.85
YDL041W	YDL041W	RKM2	Q03942	479 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms