RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
MCF2L2-214ENST00000640043 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
MCF2L2-214ENST00000640043 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
MCF2L2-214ENST00000640043 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
MCF2L2-214ENST00000640043 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
MCF2L2-214ENST00000640043 CPDO75976 1380 aa13.48□□□□□ -0.25
MCF2L2-214ENST00000640043 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 KCNQ2O43526 872 aa13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 TRAK1Q9UPV9 953 aa13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
MCF2L2-214ENST00000640043 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
MCF2L2-214ENST00000640043 EVA1CP58658 441 aa13.46□□□□□ -0.25
MCF2L2-214ENST00000640043 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
MCF2L2-214ENST00000640043 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
MCF2L2-214ENST00000640043 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
MCF2L2-214ENST00000640043 PLSCR1O15162 318 aa13.45□□□□□ -0.26
MCF2L2-214ENST00000640043 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
MCF2L2-214ENST00000640043 ARID3AQ99856 593 aa13.45□□□□□ -0.26
MCF2L2-214ENST00000640043 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 CHRNA2Q15822 529 aa13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
MCF2L2-214ENST00000640043 USP19O94966 1318 aa13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 OVOS2A0A0G2JMS6 1433 aa13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 OVOS2A0A0J9YW53 1432 aa13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 OVOS2Q6IE36 1432 aa13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
MCF2L2-214ENST00000640043 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
MCF2L2-214ENST00000640043 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
MCF2L2-214ENST00000640043 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
MCF2L2-214ENST00000640043 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
MCF2L2-214ENST00000640043 UTRNP46939 3433 aa13.41□□□□□ -0.26
MCF2L2-214ENST00000640043 BCL9O00512 1426 aa13.41□□□□□ -0.26
MCF2L2-214ENST00000640043 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
MCF2L2-214ENST00000640043 CHD4Q14839 1912 aa13.41□□□□□ -0.26
MCF2L2-214ENST00000640043 CRB1P82279 1406 aa13.4□□□□□ -0.26
MCF2L2-214ENST00000640043 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
MCF2L2-214ENST00000640043 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
MCF2L2-214ENST00000640043 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.26
MCF2L2-214ENST00000640043 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
MCF2L2-214ENST00000640043 ACEP12821 1306 aa13.39□□□□□ -0.27
MCF2L2-214ENST00000640043 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
MCF2L2-214ENST00000640043 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
MCF2L2-214ENST00000640043 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
MCF2L2-214ENST00000640043 DCAF11Q8TEB1 546 aa13.38□□□□□ -0.27
MCF2L2-214ENST00000640043 CDK19Q9BWU1 502 aa13.38□□□□□ -0.27
MCF2L2-214ENST00000640043 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
MCF2L2-214ENST00000640043 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
MCF2L2-214ENST00000640043 GCP02774 474 aa13.37□□□□□ -0.27
MCF2L2-214ENST00000640043 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
MCF2L2-214ENST00000640043 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
MCF2L2-214ENST00000640043 DDB1Q16531 1140 aa13.35□□□□□ -0.27
MCF2L2-214ENST00000640043 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
MCF2L2-214ENST00000640043 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
MCF2L2-214ENST00000640043 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
MCF2L2-214ENST00000640043 ZNF784Q8NCA9 323 aaPredicted RBP13.33□□□□□ -0.28
MCF2L2-214ENST00000640043 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
MCF2L2-214ENST00000640043 SLIT3O75094 1523 aa13.33□□□□□ -0.28
MCF2L2-214ENST00000640043 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
MCF2L2-214ENST00000640043 PPIP5K1Q6PFW1 1433 aa13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 PTGER2P43116 358 aa13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 MYOM1P52179 1685 aa13.31□□□□□ -0.28
MCF2L2-214ENST00000640043 COL18A1P39060 1754 aa13.3□□□□□ -0.28
MCF2L2-214ENST00000640043 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
MCF2L2-214ENST00000640043 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
MCF2L2-214ENST00000640043 SLC24A3Q9HC58 644 aa13.3□□□□□ -0.28
MCF2L2-214ENST00000640043 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
MCF2L2-214ENST00000640043 ABCC6O95255 1503 aa13.29□□□□□ -0.28
MCF2L2-214ENST00000640043 SLC15A2Q16348 729 aa13.29□□□□□ -0.28
MCF2L2-214ENST00000640043 SYT17Q9BSW7 474 aa13.29□□□□□ -0.28
MCF2L2-214ENST00000640043 USP6P35125 1406 aa13.29□□□□□ -0.28
MCF2L2-214ENST00000640043 NLRP6P59044 892 aa13.28□□□□□ -0.28
MCF2L2-214ENST00000640043 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
MCF2L2-214ENST00000640043 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
MCF2L2-214ENST00000640043 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
MCF2L2-214ENST00000640043 ZBTB7AO95365 584 aa13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 TXNRD1Q16881 649 aa13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 CARD10Q9BWT7 1032 aa13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 CEP350Q5VT06 3117 aa13.27□□□□□ -0.29
MCF2L2-214ENST00000640043 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 CPSF1Q10570 1443 aaKnown RBP13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 CCDC7Q96M83 1385 aa13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
MCF2L2-214ENST00000640043 FHDC1Q9C0D6 1143 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms