RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 KLF16Q9BXK1 252 aaPredicted RBP10.11□□□□□ -0.79
ATM-229ENST00000639953 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
ATM-229ENST00000639953 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
ATM-229ENST00000639953 SOGA1O94964 1423 aa10.1□□□□□ -0.79
ATM-229ENST00000639953 TIMP2P16035 220 aa10.1□□□□□ -0.79
ATM-229ENST00000639953 GRM5P41594 1212 aa10.1□□□□□ -0.79
ATM-229ENST00000639953 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
ATM-229ENST00000639953 HELBQ8NG08 1087 aaPredicted RBP10.1□□□□□ -0.79
ATM-229ENST00000639953 TOP2BQ02880 1626 aa10.1□□□□□ -0.79
ATM-229ENST00000639953 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
ATM-229ENST00000639953 ADH1CP00326 375 aa10.09□□□□□ -0.79
ATM-229ENST00000639953 SKIV2LQ15477 1246 aaKnown RBP10.09□□□□□ -0.79
ATM-229ENST00000639953 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
ATM-229ENST00000639953 BCANQ96GW7 911 aa10.09□□□□□ -0.79
ATM-229ENST00000639953 AQRO60306 1485 aaKnown RBP eCLIP10.09□□□□□ -0.79
ATM-229ENST00000639953 NR3C2P08235 984 aa10.08□□□□□ -0.8
ATM-229ENST00000639953 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
ATM-229ENST00000639953 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
ATM-229ENST00000639953 TDRD9Q8NDG6 1382 aaKnown RBP10.07□□□□□ -0.8
ATM-229ENST00000639953 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
ATM-229ENST00000639953 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
ATM-229ENST00000639953 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
ATM-229ENST00000639953 VEGFBP49765 207 aa10.06□□□□□ -0.8
ATM-229ENST00000639953 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
ATM-229ENST00000639953 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
ATM-229ENST00000639953 ITPKCQ96DU7 683 aa10.06□□□□□ -0.8
ATM-229ENST00000639953 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
ATM-229ENST00000639953 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
ATM-229ENST00000639953 SH3BP5LQ7L8J4 393 aa10.05□□□□□ -0.8
ATM-229ENST00000639953 MAGEB6P1A0A0J9YX57 407 aa10.04□□□□□ -0.8
ATM-229ENST00000639953 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
ATM-229ENST00000639953 NR5A1Q13285 461 aa10.04□□□□□ -0.8
ATM-229ENST00000639953 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
ATM-229ENST00000639953 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
ATM-229ENST00000639953 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
ATM-229ENST00000639953 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
ATM-229ENST00000639953 NR6A1Q15406 480 aa10.02□□□□□ -0.81
ATM-229ENST00000639953 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
ATM-229ENST00000639953 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.81
ATM-229ENST00000639953 WIPF1O43516 503 aa10.01□□□□□ -0.81
ATM-229ENST00000639953 SCARF1Q14162 830 aa10.01□□□□□ -0.81
ATM-229ENST00000639953 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
ATM-229ENST00000639953 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
ATM-229ENST00000639953 DDRGK1Q96HY6 314 aa10.01□□□□□ -0.81
ATM-229ENST00000639953 PBRM1Q86U86 1689 aa10.01□□□□□ -0.81
ATM-229ENST00000639953 ABCA5Q8WWZ7 1642 aa10□□□□□ -0.81
ATM-229ENST00000639953 C6orf118Q5T5N4 469 aa10□□□□□ -0.81
ATM-229ENST00000639953 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
ATM-229ENST00000639953 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
ATM-229ENST00000639953 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
ATM-229ENST00000639953 CHD1O14646 1710 aa9.99□□□□□ -0.81
ATM-229ENST00000639953 SNAPC4Q5SXM2 1469 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 AP1G2O75843 785 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 FSHRP23945 695 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
ATM-229ENST00000639953 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
ATM-229ENST00000639953 PDXDC2PQ6P474 469 aa9.97□□□□□ -0.81
ATM-229ENST00000639953 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
ATM-229ENST00000639953 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
ATM-229ENST00000639953 GRIN2BQ13224 1484 aa9.97□□□□□ -0.81
ATM-229ENST00000639953 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
ATM-229ENST00000639953 MAP4K5Q9Y4K4 846 aa9.96□□□□□ -0.82
ATM-229ENST00000639953 GMPRP36959 345 aa9.95□□□□□ -0.82
ATM-229ENST00000639953 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
ATM-229ENST00000639953 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
ATM-229ENST00000639953 BMP2P12643 396 aa9.94□□□□□ -0.82
ATM-229ENST00000639953 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
ATM-229ENST00000639953 HMX1Q9NP08 348 aaPredicted RBP9.94□□□□□ -0.82
ATM-229ENST00000639953 MAGI1Q96QZ7 1491 aaPredicted RBP9.93□□□□□ -0.82
ATM-229ENST00000639953 H3BM21 787 aa9.93□□□□□ -0.82
ATM-229ENST00000639953 INSM1Q01101 510 aaPredicted RBP9.93□□□□□ -0.82
ATM-229ENST00000639953 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
ATM-229ENST00000639953 MEIOBQ8N635 442 aa9.93□□□□□ -0.82
ATM-229ENST00000639953 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
ATM-229ENST00000639953 LINC00528Q8N1L1 170 aa9.92□□□□□ -0.82
ATM-229ENST00000639953 MAN1A2O60476 641 aa9.91□□□□□ -0.82
ATM-229ENST00000639953 RFC5P40937 340 aa9.91□□□□□ -0.82
ATM-229ENST00000639953 CBLBQ13191 982 aa9.91□□□□□ -0.82
ATM-229ENST00000639953 PPP1R26Q5T8A7 1209 aaPredicted RBP9.91□□□□□ -0.82
ATM-229ENST00000639953 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
ATM-229ENST00000639953 IRF7Q92985 503 aa9.91□□□□□ -0.82
ATM-229ENST00000639953 KCTD15Q96SI1 283 aaPredicted RBP9.91□□□□□ -0.82
ATM-229ENST00000639953 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
ATM-229ENST00000639953 ADAMTS12P58397 1594 aa9.9□□□□□ -0.82
ATM-229ENST00000639953 UPP2O95045 317 aa9.9□□□□□ -0.82
ATM-229ENST00000639953 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
ATM-229ENST00000639953 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.82
ATM-229ENST00000639953 SYNJ2O15056 1496 aa9.9□□□□□ -0.83
ATM-229ENST00000639953 RUSC2Q8N2Y8 1516 aa9.89□□□□□ -0.83
ATM-229ENST00000639953 USP17L8P0C7I0 530 aa9.89□□□□□ -0.83
ATM-229ENST00000639953 PTK2Q05397 1052 aa9.89□□□□□ -0.83
ATM-229ENST00000639953 SOS2Q07890 1332 aaPredicted RBP9.88□□□□□ -0.83
ATM-229ENST00000639953 ADAM32Q8TC27 787 aa9.88□□□□□ -0.83
ATM-229ENST00000639953 SLC10A4Q96EP9 437 aa9.88□□□□□ -0.83
ATM-229ENST00000639953 TSEN34Q9BSV6 310 aaKnown RBP9.88□□□□□ -0.83
ATM-229ENST00000639953 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
ATM-229ENST00000639953 DNMT3LQ9UJW3 386 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms