RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 NFAT5O94916 1531 aa27.64■■■□□ 2.01
RBM42-204ENST00000589559 RGS12O14924 1447 aa27.63■■■□□ 2.01
RBM42-204ENST00000589559 KNSTRNQ9Y448 316 aa27.62■■■□□ 2.01
RBM42-204ENST00000589559 BARGINQ6ZT62 677 aa27.61■■■□□ 2.01
RBM42-204ENST00000589559 SEPT12Q8IYM1 358 aa27.61■■■□□ 2.01
RBM42-204ENST00000589559 GLI3P10071 1580 aa27.61■■■□□ 2.01
RBM42-204ENST00000589559 COL5A2P05997 1499 aaPredicted RBP27.6■■■□□ 2.01
RBM42-204ENST00000589559 A0A0G2JS52 829 aa27.6■■■□□ 2.01
RBM42-204ENST00000589559 CSB-PGBD3P0DP91 1061 aa27.6■■■□□ 2.01
RBM42-204ENST00000589559 MYT1Q01538 1121 aa27.6■■■□□ 2.01
RBM42-204ENST00000589559 TOM1L2Q6ZVM7 507 aa27.6■■■□□ 2.01
RBM42-204ENST00000589559 TCP11L2Q8N4U5 519 aa27.6■■■□□ 2.01
RBM42-204ENST00000589559 WDR17Q8IZU2 1322 aa27.59■■■□□ 2.01
RBM42-204ENST00000589559 KIF20BQ96Q89 1820 aa27.59■■■□□ 2.01
RBM42-204ENST00000589559 FAM98CQ17RN3 349 aaKnown RBP27.59■■■□□ 2.01
RBM42-204ENST00000589559 LARP1Q6PKG0 1096 aaKnown RBP27.59■■■□□ 2.01
RBM42-204ENST00000589559 IP6K1Q92551 441 aa27.59■■■□□ 2.01
RBM42-204ENST00000589559 AXIN2Q9Y2T1 843 aa27.59■■■□□ 2.01
RBM42-204ENST00000589559 CRB1P82279 1406 aa27.59■■■□□ 2.01
RBM42-204ENST00000589559 AMPHP49418 695 aa27.58■■■□□ 2.01
RBM42-204ENST00000589559 NSD2O96028 1365 aa27.57■■■□□ 2
RBM42-204ENST00000589559 BLMP54132 1417 aaPredicted RBP27.57■■■□□ 2
RBM42-204ENST00000589559 COL18A1P39060 1754 aa27.57■■■□□ 2
RBM42-204ENST00000589559 CDCA7Q9BWT1 371 aaPredicted RBP27.56■■■□□ 2
RBM42-204ENST00000589559 LTN1O94822 1766 aa27.56■■■□□ 2
RBM42-204ENST00000589559 KIF24Q5T7B8 1368 aa27.55■■■□□ 2
RBM42-204ENST00000589559 USP35Q9P2H5 1018 aa27.55■■■□□ 2
RBM42-204ENST00000589559 CCDC7Q96M83 1385 aa27.54■■■□□ 2
RBM42-204ENST00000589559 CARD10Q9BWT7 1032 aa27.54■■■□□ 2
RBM42-204ENST00000589559 KRT27Q7Z3Y8 459 aa27.53■■■□□ 2
RBM42-204ENST00000589559 MAP3K19Q56UN5 1328 aa27.52■■■□□ 2
RBM42-204ENST00000589559 RTL1A6NKG5 1358 aa27.52■■■□□ 2
RBM42-204ENST00000589559 CCDC125Q86Z20 511 aa27.51■■□□□ 1.99
RBM42-204ENST00000589559 RGPD5Q99666 1765 aa27.51■■□□□ 1.99
RBM42-204ENST00000589559 ERBB3P21860 1342 aa27.5■■□□□ 1.99
RBM42-204ENST00000589559 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
RBM42-204ENST00000589559 HOXC9P31274 260 aa27.49■■□□□ 1.99
RBM42-204ENST00000589559 ANKRD24Q8TF21 1146 aa27.49■■□□□ 1.99
RBM42-204ENST00000589559 BRWD3Q6RI45 1802 aa27.48■■□□□ 1.99
RBM42-204ENST00000589559 PDE3BQ13370 1112 aa27.47■■□□□ 1.99
RBM42-204ENST00000589559 RRS1Q15050 365 aaKnown RBP27.46■■□□□ 1.99
RBM42-204ENST00000589559 MORC1Q86VD1 984 aa27.46■■□□□ 1.99
RBM42-204ENST00000589559 UPF1Q92900 1129 aaKnown RBP eCLIP27.46■■□□□ 1.99
RBM42-204ENST00000589559 NLRP2Q9NX02 1062 aa27.46■■□□□ 1.99
RBM42-204ENST00000589559 EP400Q96L91 3159 aa27.45■■□□□ 1.98
RBM42-204ENST00000589559 FLT4P35916 1363 aa27.45■■□□□ 1.98
RBM42-204ENST00000589559 SMG6Q86US8 1419 aaKnown RBP27.44■■□□□ 1.98
RBM42-204ENST00000589559 PER1O15534 1290 aaPredicted RBP27.42■■□□□ 1.98
RBM42-204ENST00000589559 INSRP06213 1382 aa27.42■■□□□ 1.98
RBM42-204ENST00000589559 FBLN1P23142 703 aa27.41■■□□□ 1.98
RBM42-204ENST00000589559 ANKRD26Q9UPS8 1709 aa27.41■■□□□ 1.98
RBM42-204ENST00000589559 THSD7AQ9UPZ6 1657 aa27.41■■□□□ 1.98
RBM42-204ENST00000589559 DDB1Q16531 1140 aa27.41■■□□□ 1.98
RBM42-204ENST00000589559 AMER1Q5JTC6 1135 aaPredicted RBP27.4■■□□□ 1.98
RBM42-204ENST00000589559 FAM196AQ6ZSG2 479 aa27.4■■□□□ 1.98
RBM42-204ENST00000589559 LTV1Q96GA3 475 aaPredicted RBP27.4■■□□□ 1.98
RBM42-204ENST00000589559 FAM208AQ9UK61 1670 aaKnown RBP27.39■■□□□ 1.97
RBM42-204ENST00000589559 EXOC5O00471 708 aa27.39■■□□□ 1.97
RBM42-204ENST00000589559 PPM1GO15355 546 aaPredicted RBP27.39■■□□□ 1.97
RBM42-204ENST00000589559 SF3B2Q13435 895 aaKnown RBP27.39■■□□□ 1.97
RBM42-204ENST00000589559 NPC1L1Q9UHC9 1359 aa27.38■■□□□ 1.97
RBM42-204ENST00000589559 POLKQ9UBT6 870 aa27.38■■□□□ 1.97
RBM42-204ENST00000589559 WNK3Q9BYP7 1800 aa27.37■■□□□ 1.97
RBM42-204ENST00000589559 IL2RBP14784 551 aa27.37■■□□□ 1.97
RBM42-204ENST00000589559 TNNT2P45379 298 aaPredicted RBP27.36■■□□□ 1.97
RBM42-204ENST00000589559 MAP2P11137 1827 aaKnown RBP27.35■■□□□ 1.97
RBM42-204ENST00000589559 HSP90AB2PQ58FF8 381 aa27.35■■□□□ 1.97
RBM42-204ENST00000589559 EMILIN1Q9Y6C2 1016 aa27.35■■□□□ 1.97
RBM42-204ENST00000589559 PARP4Q9UKK3 1724 aaKnown RBP27.34■■□□□ 1.97
RBM42-204ENST00000589559 DISP2A7MBM2 1401 aa27.28■■□□□ 1.96
RBM42-204ENST00000589559 CC2D1BQ5T0F9 858 aaKnown RBP27.28■■□□□ 1.96
RBM42-204ENST00000589559 RAPGEF4Q8WZA2 1011 aa27.28■■□□□ 1.96
RBM42-204ENST00000589559 NBPF6Q5VWK0 638 aa27.27■■□□□ 1.96
RBM42-204ENST00000589559 NBPF4Q96M43 638 aa27.27■■□□□ 1.96
RBM42-204ENST00000589559 OVOS2A0A0G2JMS6 1433 aa27.25■■□□□ 1.95
RBM42-204ENST00000589559 TATP17735 454 aaPredicted RBP27.24■■□□□ 1.95
RBM42-204ENST00000589559 PEAK1Q9H792 1746 aa27.23■■□□□ 1.95
RBM42-204ENST00000589559 BAG6P46379 1132 aa27.23■■□□□ 1.95
RBM42-204ENST00000589559 LRRC37A3O60309 1634 aa27.23■■□□□ 1.95
RBM42-204ENST00000589559 BCL9O00512 1426 aa27.22■■□□□ 1.95
RBM42-204ENST00000589559 TNS2Q63HR2 1409 aa27.22■■□□□ 1.95
RBM42-204ENST00000589559 FAM182BQ5T319 152 aa27.21■■□□□ 1.95
RBM42-204ENST00000589559 RGPD2P0DJD1 1756 aa27.21■■□□□ 1.95
RBM42-204ENST00000589559 ZCRB1Q8TBF4 217 aaKnown RBP27.2■■□□□ 1.95
RBM42-204ENST00000589559 MARCH10Q8NA82 808 aaPredicted RBP27.19■■□□□ 1.94
RBM42-204ENST00000589559 MTHFSP49914 203 aa27.18■■□□□ 1.94
RBM42-204ENST00000589559 EIF4A2Q14240 407 aaKnown RBP27.18■■□□□ 1.94
RBM42-204ENST00000589559 TRIM37O94972 964 aa27.17■■□□□ 1.94
RBM42-204ENST00000589559 EYA1Q99502 592 aa27.17■■□□□ 1.94
RBM42-204ENST00000589559 PLEKHG2Q9H7P9 1386 aa27.17■■□□□ 1.94
RBM42-204ENST00000589559 RGPD1P0DJD0 1748 aa27.17■■□□□ 1.94
RBM42-204ENST00000589559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.16■■□□□ 1.94
RBM42-204ENST00000589559 USHBP1Q8N6Y0 703 aa27.15■■□□□ 1.94
RBM42-204ENST00000589559 DDX54Q8TDD1 881 aaKnown RBP27.14■■□□□ 1.93
RBM42-204ENST00000589559 CFAP53Q96M91 514 aa27.14■■□□□ 1.93
RBM42-204ENST00000589559 BCL11BQ9C0K0 894 aaPredicted RBP27.14■■□□□ 1.93
RBM42-204ENST00000589559 SPG7Q9UQ90 795 aa27.14■■□□□ 1.93
RBM42-204ENST00000589559 APBA3O96018 575 aa27.13■■□□□ 1.93
RBM42-204ENST00000589559 NCAPD2Q15021 1401 aa27.12■■□□□ 1.93
RBM42-204ENST00000589559 DDX10Q13206 875 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms