RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 FLT4P35916 1363 aa12.25□□□□□ -0.45
CIRBP-218ENST00000588344 INSRP06213 1382 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 RXRBP28702 533 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
CIRBP-218ENST00000588344 WDR17Q8IZU2 1322 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-218ENST00000588344 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 RGS17Q9UGC6 210 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-218ENST00000588344 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
CIRBP-218ENST00000588344 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
CIRBP-218ENST00000588344 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
CIRBP-218ENST00000588344 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
CIRBP-218ENST00000588344 MTHFSP49914 203 aa12.23□□□□□ -0.45
CIRBP-218ENST00000588344 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
CIRBP-218ENST00000588344 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
CIRBP-218ENST00000588344 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
CIRBP-218ENST00000588344 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
CIRBP-218ENST00000588344 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
CIRBP-218ENST00000588344 ERBB3P21860 1342 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 SPATA31A5Q5VU36 1347 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 SPATA31A7Q8IWB4 1347 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 ANP32CO43423 234 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
CIRBP-218ENST00000588344 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
CIRBP-218ENST00000588344 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-218ENST00000588344 ATRNO75882 1429 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
CIRBP-218ENST00000588344 BARGINQ6ZT62 677 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 PRKRIP1Q9H875 184 aaPredicted RBP12.21□□□□□ -0.45
CIRBP-218ENST00000588344 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
CIRBP-218ENST00000588344 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.46
CIRBP-218ENST00000588344 SPATA31A1Q5TZJ5 1347 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 CRB1P82279 1406 aa12.2□□□□□ -0.46
CIRBP-218ENST00000588344 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
CIRBP-218ENST00000588344 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-218ENST00000588344 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
CIRBP-218ENST00000588344 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
CIRBP-218ENST00000588344 EIF4A2Q14240 407 aaKnown RBP12.18□□□□□ -0.46
CIRBP-218ENST00000588344 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
CIRBP-218ENST00000588344 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
CIRBP-218ENST00000588344 LMO7Q8WWI1 1683 aa12.17□□□□□ -0.46
CIRBP-218ENST00000588344 IL13P35225 146 aa12.17□□□□□ -0.46
CIRBP-218ENST00000588344 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
CIRBP-218ENST00000588344 CDK12Q9NYV4 1490 aaPredicted RBP12.16□□□□□ -0.46
CIRBP-218ENST00000588344 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
CIRBP-218ENST00000588344 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
CIRBP-218ENST00000588344 ANKRD26Q9UPS8 1709 aa12.15□□□□□ -0.46
CIRBP-218ENST00000588344 IL2RBP14784 551 aa12.15□□□□□ -0.46
CIRBP-218ENST00000588344 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
CIRBP-218ENST00000588344 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.46
CIRBP-218ENST00000588344 EYA1Q99502 592 aa12.15□□□□□ -0.46
CIRBP-218ENST00000588344 COL18A1P39060 1754 aa12.15□□□□□ -0.46
CIRBP-218ENST00000588344 EXOC5O00471 708 aa12.14□□□□□ -0.47
CIRBP-218ENST00000588344 SEPT12Q8IYM1 358 aa12.14□□□□□ -0.47
CIRBP-218ENST00000588344 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
CIRBP-218ENST00000588344 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
CIRBP-218ENST00000588344 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
CIRBP-218ENST00000588344 A0A0G2JS52 829 aa12.13□□□□□ -0.47
CIRBP-218ENST00000588344 MYT1Q01538 1121 aa12.13□□□□□ -0.47
CIRBP-218ENST00000588344 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
CIRBP-218ENST00000588344 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-218ENST00000588344 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
CIRBP-218ENST00000588344 DDB1Q16531 1140 aa12.12□□□□□ -0.47
CIRBP-218ENST00000588344 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
CIRBP-218ENST00000588344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.474e-13■□□□□ 8.8
CIRBP-218ENST00000588344 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
CIRBP-218ENST00000588344 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
CIRBP-218ENST00000588344 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
CIRBP-218ENST00000588344 FCHSD2O94868 740 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 NRAPQ86VF7 1730 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 LTN1O94822 1766 aa12.1□□□□□ -0.47
CIRBP-218ENST00000588344 NEFMP07197 916 aa12.09□□□□□ -0.47
CIRBP-218ENST00000588344 U2AF1L5P0DN76 240 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-218ENST00000588344 U2AF1Q01081 240 aaKnown RBP eCLIP12.09□□□□□ -0.47
CIRBP-218ENST00000588344 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
CIRBP-218ENST00000588344 ZCRB1Q8TBF4 217 aaKnown RBP12.09□□□□□ -0.47
CIRBP-218ENST00000588344 NCAPD2Q15021 1401 aa12.09□□□□□ -0.47
CIRBP-218ENST00000588344 PEAK1Q9H792 1746 aa12.08□□□□□ -0.47
CIRBP-218ENST00000588344 KDRP35968 1356 aa12.08□□□□□ -0.48
CIRBP-218ENST00000588344 WDR43Q15061 677 aaKnown RBP eCLIP12.08□□□□□ -0.48
CIRBP-218ENST00000588344 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
CIRBP-218ENST00000588344 MAP2P11137 1827 aaKnown RBP12.08□□□□□ -0.48
CIRBP-218ENST00000588344 DISP2A7MBM2 1401 aa12.08□□□□□ -0.48
CIRBP-218ENST00000588344 GLI3P10071 1580 aa12.07□□□□□ -0.48
CIRBP-218ENST00000588344 FAM208AQ9UK61 1670 aaKnown RBP12.06□□□□□ -0.48
CIRBP-218ENST00000588344 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
CIRBP-218ENST00000588344 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms