RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 BCL9O00512 1426 aa11.8□□□□□ -0.52
MIR4258-201ENST00000580920 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
MIR4258-201ENST00000580920 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
MIR4258-201ENST00000580920 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
MIR4258-201ENST00000580920 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
MIR4258-201ENST00000580920 MARCH10Q8NA82 808 aaPredicted RBP11.79□□□□□ -0.52
MIR4258-201ENST00000580920 TRAK1Q9UPV9 953 aa11.79□□□□□ -0.52
MIR4258-201ENST00000580920 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
MIR4258-201ENST00000580920 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
MIR4258-201ENST00000580920 DDB1Q16531 1140 aa11.78□□□□□ -0.52
MIR4258-201ENST00000580920 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
MIR4258-201ENST00000580920 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
MIR4258-201ENST00000580920 TUBGCP6Q96RT7 1819 aa11.77□□□□□ -0.52
MIR4258-201ENST00000580920 SLIT3O75094 1523 aa11.77□□□□□ -0.52
MIR4258-201ENST00000580920 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.53
MIR4258-201ENST00000580920 COL18A1P39060 1754 aa11.77□□□□□ -0.53
MIR4258-201ENST00000580920 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
MIR4258-201ENST00000580920 HSPA6P17066 643 aa11.76□□□□□ -0.53
MIR4258-201ENST00000580920 ADCY9O60503 1353 aa11.76□□□□□ -0.53
MIR4258-201ENST00000580920 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
MIR4258-201ENST00000580920 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
MIR4258-201ENST00000580920 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
MIR4258-201ENST00000580920 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
MIR4258-201ENST00000580920 ACEP12821 1306 aa11.74□□□□□ -0.53
MIR4258-201ENST00000580920 ABCC6O95255 1503 aa11.74□□□□□ -0.53
MIR4258-201ENST00000580920 BTAF1O14981 1849 aa11.74□□□□□ -0.53
MIR4258-201ENST00000580920 PIK3C2AO00443 1686 aa11.73□□□□□ -0.53
MIR4258-201ENST00000580920 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
MIR4258-201ENST00000580920 GCP02774 474 aa11.72□□□□□ -0.53
MIR4258-201ENST00000580920 ABTB2Q8N961 1025 aa11.72□□□□□ -0.53
MIR4258-201ENST00000580920 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
MIR4258-201ENST00000580920 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
MIR4258-201ENST00000580920 TOM1L2Q6ZVM7 507 aa11.71□□□□□ -0.53
MIR4258-201ENST00000580920 WDR17Q8IZU2 1322 aa11.7□□□□□ -0.54
MIR4258-201ENST00000580920 CAPN15O75808 1086 aa11.7□□□□□ -0.54
MIR4258-201ENST00000580920 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
MIR4258-201ENST00000580920 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
MIR4258-201ENST00000580920 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
MIR4258-201ENST00000580920 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
MIR4258-201ENST00000580920 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
MIR4258-201ENST00000580920 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
MIR4258-201ENST00000580920 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
MIR4258-201ENST00000580920 MPHOSPH9Q99550 1183 aa11.68□□□□□ -0.54
MIR4258-201ENST00000580920 PCNTO95613 3336 aa11.68□□□□□ -0.54
MIR4258-201ENST00000580920 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
MIR4258-201ENST00000580920 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
MIR4258-201ENST00000580920 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
MIR4258-201ENST00000580920 USP6P35125 1406 aa11.67□□□□□ -0.54
MIR4258-201ENST00000580920 POLD1P28340 1107 aa11.66□□□□□ -0.54
MIR4258-201ENST00000580920 NLRP13Q86W25 1043 aa11.66□□□□□ -0.54
MIR4258-201ENST00000580920 CDK19Q9BWU1 502 aa11.66□□□□□ -0.54
MIR4258-201ENST00000580920 NFAT5O94916 1531 aa11.65□□□□□ -0.54
MIR4258-201ENST00000580920 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
MIR4258-201ENST00000580920 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
MIR4258-201ENST00000580920 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
MIR4258-201ENST00000580920 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
MIR4258-201ENST00000580920 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
MIR4258-201ENST00000580920 KIF3CO14782 793 aa11.63□□□□□ -0.55
MIR4258-201ENST00000580920 GRIN3BO60391 1043 aa11.63□□□□□ -0.55
MIR4258-201ENST00000580920 KCNQ4P56696 695 aa11.63□□□□□ -0.55
MIR4258-201ENST00000580920 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
MIR4258-201ENST00000580920 DNAJC5GQ8N7S2 189 aa11.62□□□□□ -0.55
MIR4258-201ENST00000580920 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
MIR4258-201ENST00000580920 DOT1LQ8TEK3 1739 aa11.62□□□□□ -0.55
MIR4258-201ENST00000580920 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
MIR4258-201ENST00000580920 CICQ96RK0 1608 aaPredicted RBP11.61□□□□□ -0.55
MIR4258-201ENST00000580920 EXOC5O00471 708 aa11.61□□□□□ -0.55
MIR4258-201ENST00000580920 NLRP6P59044 892 aa11.61□□□□□ -0.55
MIR4258-201ENST00000580920 SOX12O15370 315 aa11.6□□□□□ -0.55
MIR4258-201ENST00000580920 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
MIR4258-201ENST00000580920 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
MIR4258-201ENST00000580920 WWC3Q9ULE0 1092 aa11.6□□□□□ -0.55
MIR4258-201ENST00000580920 LY75O60449 1722 aa11.6□□□□□ -0.55
MIR4258-201ENST00000580920 APLP1P51693 650 aa11.59□□□□□ -0.55
MIR4258-201ENST00000580920 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
MIR4258-201ENST00000580920 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
MIR4258-201ENST00000580920 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
MIR4258-201ENST00000580920 NSD2O96028 1365 aa11.58□□□□□ -0.56
MIR4258-201ENST00000580920 HTRA3P83110 453 aa11.58□□□□□ -0.56
MIR4258-201ENST00000580920 PRELPP51888 382 aa11.57□□□□□ -0.56
MIR4258-201ENST00000580920 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
MIR4258-201ENST00000580920 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
MIR4258-201ENST00000580920 TNS4Q8IZW8 715 aa11.56□□□□□ -0.56
MIR4258-201ENST00000580920 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
MIR4258-201ENST00000580920 TOGARAM1Q9Y4F4 1720 aa11.56□□□□□ -0.56
MIR4258-201ENST00000580920 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
MIR4258-201ENST00000580920 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
MIR4258-201ENST00000580920 C5P01031 1676 aa11.55□□□□□ -0.56
MIR4258-201ENST00000580920 ERBB3P21860 1342 aa11.55□□□□□ -0.56
MIR4258-201ENST00000580920 SLC34A2O95436 690 aa11.54□□□□□ -0.56
MIR4258-201ENST00000580920 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
MIR4258-201ENST00000580920 KIAA1210Q9ULL0 1709 aa11.54□□□□□ -0.56
MIR4258-201ENST00000580920 LTN1O94822 1766 aa11.54□□□□□ -0.56
MIR4258-201ENST00000580920 MSH5O43196 834 aa11.53□□□□□ -0.56
MIR4258-201ENST00000580920 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
MIR4258-201ENST00000580920 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.56
MIR4258-201ENST00000580920 IL2RBP14784 551 aa11.52□□□□□ -0.57
MIR4258-201ENST00000580920 JMYQ8N9B5 988 aa11.52□□□□□ -0.57
MIR4258-201ENST00000580920 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
MIR4258-201ENST00000580920 CABP1Q9NZU7 370 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms