RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	ANKRD36B	Q8N2N9	1353 aa		19.05	■□□□□ 0.64
CSNK1D-208	ENST00000578501	LMO7	Q8WWI1	1683 aa		19.04	■□□□□ 0.64
CSNK1D-208	ENST00000578501	AATK	Q6ZMQ8	1374 aa		19.04	■□□□□ 0.64
CSNK1D-208	ENST00000578501	NBPF14	Q5TI25	921 aa		19.03	■□□□□ 0.64
CSNK1D-208	ENST00000578501	USP54	Q70EL1	1684 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	CAMTA1	Q9Y6Y1	1673 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	TRIM37	O94972	964 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	EVA1C	P58658	441 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	ARHGEF25	Q86VW2	580 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	NME9	Q86XW9	330 aa		19.02	■□□□□ 0.64
CSNK1D-208	ENST00000578501	APBA3	O96018	575 aa		19.01	■□□□□ 0.63
CSNK1D-208	ENST00000578501	STRN4	Q9NRL3	753 aa		19.01	■□□□□ 0.63
CSNK1D-208	ENST00000578501	SPATA31A1	Q5TZJ5	1347 aa		19	■□□□□ 0.63
CSNK1D-208	ENST00000578501	HSPA5	P11021	654 aa	Known RBP	19	■□□□□ 0.63
CSNK1D-208	ENST00000578501	NFAT5	O94916	1531 aa		19	■□□□□ 0.63
CSNK1D-208	ENST00000578501	THSD7A	Q9UPZ6	1657 aa		18.99	■□□□□ 0.63
CSNK1D-208	ENST00000578501	COL5A2	P05997	1499 aa	Predicted RBP	18.99	■□□□□ 0.63
CSNK1D-208	ENST00000578501	TNS1	Q9HBL0	1735 aa	Known RBP	18.99	■□□□□ 0.63
CSNK1D-208	ENST00000578501	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.98	■□□□□ 0.63
CSNK1D-208	ENST00000578501	OVOS2	A0A0J9YW53	1432 aa		18.98	■□□□□ 0.63
CSNK1D-208	ENST00000578501	OVOS2	Q6IE36	1432 aa		18.98	■□□□□ 0.63
CSNK1D-208	ENST00000578501	LARP1	Q6PKG0	1096 aa	Known RBP	18.97	■□□□□ 0.63
CSNK1D-208	ENST00000578501	COL18A1	P39060	1754 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	ABCC6	O95255	1503 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	PDE3B	Q13370	1112 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	BARGIN	Q6ZT62	677 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	SPON1	Q9HCB6	807 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	AXIN2	Q9Y2T1	843 aa		18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	THRAP3	Q9Y2W1	955 aa	Known RBP	18.96	■□□□□ 0.63
CSNK1D-208	ENST00000578501	ZBTB7C	A1YPR0	619 aa		18.95	■□□□□ 0.62
CSNK1D-208	ENST00000578501	SOX12	O15370	315 aa		18.95	■□□□□ 0.62
CSNK1D-208	ENST00000578501	TCP11L2	Q8N4U5	519 aa		18.94	■□□□□ 0.62
CSNK1D-208	ENST00000578501	COG3	Q96JB2	828 aa		18.94	■□□□□ 0.62
CSNK1D-208	ENST00000578501	CRB1	P82279	1406 aa		18.93	■□□□□ 0.62
CSNK1D-208	ENST00000578501	MYOM1	P52179	1685 aa		18.92	■□□□□ 0.62
CSNK1D-208	ENST00000578501	FYB1	O15117	783 aa		18.92	■□□□□ 0.62
CSNK1D-208	ENST00000578501	KCNQ2	O43526	872 aa		18.92	■□□□□ 0.62
CSNK1D-208	ENST00000578501	WDR17	Q8IZU2	1322 aa		18.92	■□□□□ 0.62
CSNK1D-208	ENST00000578501	C11orf95	C9JLR9	678 aa	Predicted RBP	18.91	■□□□□ 0.62
CSNK1D-208	ENST00000578501	CARD14	Q9BXL6	1004 aa		18.91	■□□□□ 0.62
CSNK1D-208	ENST00000578501	USP35	Q9P2H5	1018 aa		18.91	■□□□□ 0.62
CSNK1D-208	ENST00000578501	TOM1L2	Q6ZVM7	507 aa		18.88	■□□□□ 0.61
CSNK1D-208	ENST00000578501	CARD10	Q9BWT7	1032 aa		18.88	■□□□□ 0.61
CSNK1D-208	ENST00000578501	RREB1	Q92766	1687 aa		18.87	■□□□□ 0.61
CSNK1D-208	ENST00000578501	NSD3	Q9BZ95	1437 aa		18.87	■□□□□ 0.61
CSNK1D-208	ENST00000578501	GGNBP2	Q9H3C7	697 aa		18.87	■□□□□ 0.61
CSNK1D-208	ENST00000578501	IP6K1	Q92551	441 aa		18.86	■□□□□ 0.61
CSNK1D-208	ENST00000578501	POLR3GL	Q9BT43	218 aa		18.86	■□□□□ 0.61
CSNK1D-208	ENST00000578501	LTN1	O94822	1766 aa		18.86	■□□□□ 0.61
CSNK1D-208	ENST00000578501	ERBB3	P21860	1342 aa		18.85	■□□□□ 0.61
CSNK1D-208	ENST00000578501	CSB-PGBD3	P0DP91	1061 aa		18.85	■□□□□ 0.61
CSNK1D-208	ENST00000578501	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.85	■□□□□ 0.61
CSNK1D-208	ENST00000578501	RGPD5	Q99666	1765 aa		18.85	■□□□□ 0.61
CSNK1D-208	ENST00000578501	CGNL1	Q0VF96	1302 aa		18.84	■□□□□ 0.61
CSNK1D-208	ENST00000578501	NUP188	Q5SRE5	1749 aa		18.84	■□□□□ 0.61
CSNK1D-208	ENST00000578501	CCDC7	Q96M83	1385 aa		18.83	■□□□□ 0.61
CSNK1D-208	ENST00000578501	MAP3K19	Q56UN5	1328 aa		18.83	■□□□□ 0.61
CSNK1D-208	ENST00000578501	KIF20B	Q96Q89	1820 aa		18.82	■□□□□ 0.6
CSNK1D-208	ENST00000578501	ANKRD24	Q8TF21	1146 aa		18.82	■□□□□ 0.6
CSNK1D-208	ENST00000578501	PANK3	Q9H999	370 aa		18.82	■□□□□ 0.6
CSNK1D-208	ENST00000578501	RTL1	A6NKG5	1358 aa		18.81	■□□□□ 0.6
CSNK1D-208	ENST00000578501	PARP4	Q9UKK3	1724 aa	Known RBP	18.81	■□□□□ 0.6
CSNK1D-208	ENST00000578501	HOXC9	P31274	260 aa		18.81	■□□□□ 0.6
CSNK1D-208	ENST00000578501	PLSCR1	O15162	318 aa		18.8	■□□□□ 0.6
CSNK1D-208	ENST00000578501	FBLN1	P23142	703 aa		18.8	■□□□□ 0.6
CSNK1D-208	ENST00000578501	AMPH	P49418	695 aa		18.8	■□□□□ 0.6
CSNK1D-208	ENST00000578501	KIF24	Q5T7B8	1368 aa		18.8	■□□□□ 0.6
CSNK1D-208	ENST00000578501	KIF7	Q2M1P5	1343 aa		18.79	■□□□□ 0.6
CSNK1D-208	ENST00000578501	RRS1	Q15050	365 aa	Known RBP	18.78	■□□□□ 0.6
CSNK1D-208	ENST00000578501	DDB1	Q16531	1140 aa		18.78	■□□□□ 0.6
CSNK1D-208	ENST00000578501	NLRP2	Q9NX02	1062 aa		18.78	■□□□□ 0.6
CSNK1D-208	ENST00000578501	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.77	■□□□□ 0.6
CSNK1D-208	ENST00000578501	NSD2	O96028	1365 aa		18.76	■□□□□ 0.59
CSNK1D-208	ENST00000578501	WNK3	Q9BYP7	1800 aa		18.76	■□□□□ 0.59
CSNK1D-208	ENST00000578501	OVOS2	A0A0G2JMS6	1433 aa		18.75	■□□□□ 0.59
CSNK1D-208	ENST00000578501	LRRC37A3	O60309	1634 aa		18.75	■□□□□ 0.59
CSNK1D-208	ENST00000578501	FAM208A	Q9UK61	1670 aa	Known RBP	18.74	■□□□□ 0.59
CSNK1D-208	ENST00000578501	INSR	P06213	1382 aa		18.74	■□□□□ 0.59
CSNK1D-208	ENST00000578501	FLT4	P35916	1363 aa		18.74	■□□□□ 0.59
CSNK1D-208	ENST00000578501	EXOC5	O00471	708 aa		18.73	■□□□□ 0.59
CSNK1D-208	ENST00000578501	IL2RB	P14784	551 aa		18.73	■□□□□ 0.59
CSNK1D-208	ENST00000578501	LTV1	Q96GA3	475 aa	Predicted RBP	18.73	■□□□□ 0.59
CSNK1D-208	ENST00000578501	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.73	■□□□□ 0.59
CSNK1D-208	ENST00000578501	BCL9	O00512	1426 aa		18.73	■□□□□ 0.59
CSNK1D-208	ENST00000578501	KNSTRN	Q9Y448	316 aa		18.72	■□□□□ 0.59
CSNK1D-208	ENST00000578501	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.71	■□□□□ 0.59
CSNK1D-208	ENST00000578501	RGPD4	Q7Z3J3	1758 aa		18.71	■□□□□ 0.59
CSNK1D-208	ENST00000578501	HSP90AB2P	Q58FF8	381 aa		18.71	■□□□□ 0.59
CSNK1D-208	ENST00000578501	TNS2	Q63HR2	1409 aa		18.71	■□□□□ 0.59
CSNK1D-208	ENST00000578501	SMG6	Q86US8	1419 aa	Known RBP	18.71	■□□□□ 0.59
CSNK1D-208	ENST00000578501	SENP3-EIF4A1	A0A087X0R7	540 aa		18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	MARCH10	Q8NA82	808 aa	Predicted RBP	18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	PEAK1	Q9H792	1746 aa		18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	ANKRD26	Q9UPS8	1709 aa		18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	EMILIN1	Q9Y6C2	1016 aa		18.7	■□□□□ 0.58
CSNK1D-208	ENST00000578501	ZBTB7A	O95365	584 aa		18.69	■□□□□ 0.58
CSNK1D-208	ENST00000578501	POLK	Q9UBT6	870 aa		18.69	■□□□□ 0.58
CSNK1D-208	ENST00000578501	WASHC2A	Q641Q2	1341 aa		18.69	■□□□□ 0.58
CSNK1D-208	ENST00000578501	PTGER2	P43116	358 aa		18.68	■□□□□ 0.58

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