RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 U2AF1Q01081 240 aaKnown RBP eCLIP22.54■■□□□ 1.27e-10■□□□□ 10.2
CDK5RAP3-207ENST00000578134 EIF4A2Q14240 407 aaKnown RBP22.54■■□□□ 1.2
CDK5RAP3-207ENST00000578134 JCADQ9P266 1359 aa22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 U2SURPO15042 1029 aaKnown RBP22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 FCHSD2O94868 740 aa22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 PEAK1Q9H792 1746 aa22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 LTN1O94822 1766 aa22.53■■□□□ 1.2
CDK5RAP3-207ENST00000578134 PRDM11Q9NQV5 511 aa22.51■■□□□ 1.19
CDK5RAP3-207ENST00000578134 SHPRHQ149N8 1683 aa22.51■■□□□ 1.19
CDK5RAP3-207ENST00000578134 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
CDK5RAP3-207ENST00000578134 ZBTB7CA1YPR0 619 aa22.5■■□□□ 1.19
CDK5RAP3-207ENST00000578134 NGEFQ8N5V2 710 aa22.49■■□□□ 1.19
CDK5RAP3-207ENST00000578134 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
CDK5RAP3-207ENST00000578134 SPATA31A6Q5VVP1 1343 aa22.48■■□□□ 1.19
CDK5RAP3-207ENST00000578134 NEFMP07197 916 aa22.47■■□□□ 1.19
CDK5RAP3-207ENST00000578134 ABCA3Q99758 1704 aa22.47■■□□□ 1.19
CDK5RAP3-207ENST00000578134 HSPA1LP34931 641 aa22.46■■□□□ 1.19
CDK5RAP3-207ENST00000578134 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
CDK5RAP3-207ENST00000578134 ANKRD24Q8TF21 1146 aa22.46■■□□□ 1.19
CDK5RAP3-207ENST00000578134 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
CDK5RAP3-207ENST00000578134 EYA1Q99502 592 aa22.45■■□□□ 1.18
CDK5RAP3-207ENST00000578134 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
CDK5RAP3-207ENST00000578134 COL18A1P39060 1754 aa22.45■■□□□ 1.18
CDK5RAP3-207ENST00000578134 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
CDK5RAP3-207ENST00000578134 ERBB3P21860 1342 aa22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 CHRNA2Q15822 529 aa22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
CDK5RAP3-207ENST00000578134 PLEKHF1Q96S99 279 aa22.42■■□□□ 1.18
CDK5RAP3-207ENST00000578134 KDRP35968 1356 aa22.41■■□□□ 1.18
CDK5RAP3-207ENST00000578134 SULT6B1Q6IMI4 303 aa22.41■■□□□ 1.18
CDK5RAP3-207ENST00000578134 RGPD1P0DJD0 1748 aa22.4■■□□□ 1.18
CDK5RAP3-207ENST00000578134 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
CDK5RAP3-207ENST00000578134 HMOX1P09601 288 aa22.39■■□□□ 1.17
CDK5RAP3-207ENST00000578134 EVA1CP58658 441 aa22.39■■□□□ 1.17
CDK5RAP3-207ENST00000578134 COL14A1Q05707 1796 aaKnown RBP22.39■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NUTM2BA6NNL0 878 aaPredicted RBP22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NUTM2EB1AL46 878 aaPredicted RBP22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 PRKAR2BP31323 418 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NBPF6Q5VWK0 638 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NUTM2AQ8IVF1 878 aaPredicted RBP22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 FBXO41Q8TF61 875 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NBPF4Q96M43 638 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 LMO7Q8WWI1 1683 aa22.38■■□□□ 1.17
CDK5RAP3-207ENST00000578134 ZBED9Q6R2W3 1325 aa22.37■■□□□ 1.17
CDK5RAP3-207ENST00000578134 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
CDK5RAP3-207ENST00000578134 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
CDK5RAP3-207ENST00000578134 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
CDK5RAP3-207ENST00000578134 APAF1O14727 1248 aa22.36■■□□□ 1.17
CDK5RAP3-207ENST00000578134 TCP11L2Q8N4U5 519 aa22.36■■□□□ 1.17
CDK5RAP3-207ENST00000578134 PLEKHG2Q9H7P9 1386 aa22.36■■□□□ 1.17
CDK5RAP3-207ENST00000578134 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NCAPD2Q15021 1401 aa22.35■■□□□ 1.17
CDK5RAP3-207ENST00000578134 ADAMTS2O95450 1211 aa22.35■■□□□ 1.17
CDK5RAP3-207ENST00000578134 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
CDK5RAP3-207ENST00000578134 BTG4Q9NY30 223 aa22.35■■□□□ 1.17
CDK5RAP3-207ENST00000578134 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
CDK5RAP3-207ENST00000578134 RGPD5Q99666 1765 aa22.34■■□□□ 1.17
CDK5RAP3-207ENST00000578134 CCDC27Q2M243 656 aa22.33■■□□□ 1.17
CDK5RAP3-207ENST00000578134 AEBP1Q8IUX7 1158 aa22.33■■□□□ 1.17
CDK5RAP3-207ENST00000578134 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
CDK5RAP3-207ENST00000578134 TOM1L2Q6ZVM7 507 aa22.32■■□□□ 1.16
CDK5RAP3-207ENST00000578134 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
CDK5RAP3-207ENST00000578134 PDE3BQ13370 1112 aa22.3■■□□□ 1.16
CDK5RAP3-207ENST00000578134 NFE2L2Q16236 605 aa22.3■■□□□ 1.16
CDK5RAP3-207ENST00000578134 AMOTQ4VCS5 1084 aa22.3■■□□□ 1.16
CDK5RAP3-207ENST00000578134 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
CDK5RAP3-207ENST00000578134 NGLY1Q96IV0 654 aa22.29■■□□□ 1.16
CDK5RAP3-207ENST00000578134 PHACTR3Q96KR7 559 aa22.29■■□□□ 1.16
CDK5RAP3-207ENST00000578134 CENPBP07199 599 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 LMOD3Q0VAK6 560 aa22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 FNBP4Q8N3X1 1017 aaPredicted RBP22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.28■■□□□ 1.161e-9■□□□□ 10.6
CDK5RAP3-207ENST00000578134 CRB1P82279 1406 aa22.28■■□□□ 1.16
CDK5RAP3-207ENST00000578134 SLIT2O94813 1529 aa22.27■■□□□ 1.16
CDK5RAP3-207ENST00000578134 RIPK4P57078 832 aa22.27■■□□□ 1.16
CDK5RAP3-207ENST00000578134 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
CDK5RAP3-207ENST00000578134 NWD2Q9ULI1 1742 aa22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 MEX3CQ5U5Q3 659 aaKnown RBP22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
CDK5RAP3-207ENST00000578134 UNC5CLQ8IV45 518 aa22.25■■□□□ 1.15
CDK5RAP3-207ENST00000578134 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
CDK5RAP3-207ENST00000578134 THRAP3Q9Y2W1 955 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-207ENST00000578134 NEUROD2Q15784 382 aa22.24■■□□□ 1.15
CDK5RAP3-207ENST00000578134 WWC1Q8IX03 1113 aa22.24■■□□□ 1.15
CDK5RAP3-207ENST00000578134 C8orf37Q96NL8 207 aa22.24■■□□□ 1.15
CDK5RAP3-207ENST00000578134 RGPD2P0DJD1 1756 aa22.24■■□□□ 1.15
CDK5RAP3-207ENST00000578134 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
CDK5RAP3-207ENST00000578134 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
CDK5RAP3-207ENST00000578134 SALL2Q9Y467 1007 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms