RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 PDXDC2PQ6P474 469 aa10.91□□□□□ -0.66
USP15-218ENST00000552346 ARHGAP9Q9BRR9 750 aa10.91□□□□□ -0.66
USP15-218ENST00000552346 FKBPLQ9UIM3 349 aa10.91□□□□□ -0.66
USP15-218ENST00000552346 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
USP15-218ENST00000552346 DNMT3LQ9UJW3 386 aa10.9□□□□□ -0.66
USP15-218ENST00000552346 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
USP15-218ENST00000552346 SH3D19Q5HYK7 790 aa10.89□□□□□ -0.67
USP15-218ENST00000552346 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
USP15-218ENST00000552346 NR6A1Q15406 480 aa10.88□□□□□ -0.67
USP15-218ENST00000552346 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
USP15-218ENST00000552346 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
USP15-218ENST00000552346 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
USP15-218ENST00000552346 KDM4CQ9H3R0 1056 aa10.88□□□□□ -0.67
USP15-218ENST00000552346 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
USP15-218ENST00000552346 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
USP15-218ENST00000552346 ZBTB33Q86T24 672 aa10.87□□□□□ -0.67
USP15-218ENST00000552346 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
USP15-218ENST00000552346 CDV3Q9UKY7 258 aaKnown RBP10.87□□□□□ -0.67
USP15-218ENST00000552346 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
USP15-218ENST00000552346 CBLBQ13191 982 aa10.86□□□□□ -0.67
USP15-218ENST00000552346 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
USP15-218ENST00000552346 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP15-218ENST00000552346 FAM117AQ9C073 453 aa10.86□□□□□ -0.67
USP15-218ENST00000552346 TTLL8A6PVC2 850 aa10.85□□□□□ -0.67
USP15-218ENST00000552346 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
USP15-218ENST00000552346 PPP2R2DQ66LE6 453 aa10.85□□□□□ -0.67
USP15-218ENST00000552346 AP1G2O75843 785 aa10.84□□□□□ -0.67
USP15-218ENST00000552346 Q6ZVU0 165 aa10.84□□□□□ -0.67
USP15-218ENST00000552346 PTK2Q05397 1052 aa10.83□□□□□ -0.68
USP15-218ENST00000552346 DHX9Q08211 1270 aaKnown RBP10.83□□□□□ -0.68
USP15-218ENST00000552346 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
USP15-218ENST00000552346 SPINT1O43278 529 aa10.81□□□□□ -0.68
USP15-218ENST00000552346 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
USP15-218ENST00000552346 OCSTAMPQ9BR26 566 aa10.81□□□□□ -0.68
USP15-218ENST00000552346 PTSQ03393 145 aa10.8□□□□□ -0.68
USP15-218ENST00000552346 ADAM32Q8TC27 787 aa10.8□□□□□ -0.68
USP15-218ENST00000552346 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
USP15-218ENST00000552346 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
USP15-218ENST00000552346 EPS8L1Q8TE68 723 aa10.78□□□□□ -0.68
USP15-218ENST00000552346 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
USP15-218ENST00000552346 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
USP15-218ENST00000552346 RELBQ01201 579 aa10.76□□□□□ -0.69
USP15-218ENST00000552346 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
USP15-218ENST00000552346 GPR161Q8N6U8 529 aaKnown RBP10.76□□□□□ -0.69
USP15-218ENST00000552346 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
USP15-218ENST00000552346 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
USP15-218ENST00000552346 CTSOP43234 321 aaPredicted RBP10.74□□□□□ -0.69
USP15-218ENST00000552346 RAB15P59190 212 aa10.74□□□□□ -0.69
USP15-218ENST00000552346 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
USP15-218ENST00000552346 KRT76Q01546 638 aa10.73□□□□□ -0.69
USP15-218ENST00000552346 TMEM132AQ24JP5 1023 aa10.73□□□□□ -0.69
USP15-218ENST00000552346 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
USP15-218ENST00000552346 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
USP15-218ENST00000552346 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
USP15-218ENST00000552346 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
USP15-218ENST00000552346 GTF3C3Q9Y5Q9 886 aa10.73□□□□□ -0.69
USP15-218ENST00000552346 RFC5P40937 340 aa10.72□□□□□ -0.69
USP15-218ENST00000552346 ZNF395Q9H8N7 513 aaPredicted RBP10.72□□□□□ -0.69
USP15-218ENST00000552346 POLMQ9NP87 494 aaPredicted RBP10.72□□□□□ -0.69
USP15-218ENST00000552346 SLC35F4A4IF30 521 aa10.71□□□□□ -0.69
USP15-218ENST00000552346 ZNF784Q8NCA9 323 aaPredicted RBP10.71□□□□□ -0.69
USP15-218ENST00000552346 NANOS1Q8WY41 292 aaKnown RBP10.71□□□□□ -0.69
USP15-218ENST00000552346 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
USP15-218ENST00000552346 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
USP15-218ENST00000552346 ADH1AP07327 375 aa10.69□□□□□ -0.7
USP15-218ENST00000552346 ITGA6P23229 1130 aa10.68□□□□□ -0.7
USP15-218ENST00000552346 ERICH6Q7L0X2 663 aa10.68□□□□□ -0.7
USP15-218ENST00000552346 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
USP15-218ENST00000552346 ESPNB1AK53 854 aa10.67□□□□□ -0.7
USP15-218ENST00000552346 LILRA1O75019 489 aa10.67□□□□□ -0.7
USP15-218ENST00000552346 ADD1P35611 737 aaKnown RBP10.67□□□□□ -0.7
USP15-218ENST00000552346 VWA5B2Q8N398 1253 aa10.67□□□□□ -0.7
USP15-218ENST00000552346 CDC14CA4D256 554 aa10.66□□□□□ -0.7
USP15-218ENST00000552346 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
USP15-218ENST00000552346 PTGIRP43119 386 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 KCNMA1Q12791 1236 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 RNFT1Q5M7Z0 435 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
USP15-218ENST00000552346 TMEM259Q4ZIN3 620 aa10.64□□□□□ -0.71
USP15-218ENST00000552346 FOXD4L5Q5VV16 416 aaPredicted RBP10.64□□□□□ -0.71
USP15-218ENST00000552346 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
USP15-218ENST00000552346 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
USP15-218ENST00000552346 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
USP15-218ENST00000552346 CYLDQ9NQC7 956 aa10.63□□□□□ -0.71
USP15-218ENST00000552346 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
USP15-218ENST00000552346 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
USP15-218ENST00000552346 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
USP15-218ENST00000552346 ZBBXA8MT70 800 aa10.6□□□□□ -0.71
USP15-218ENST00000552346 ZNF385CQ66K41 422 aaPredicted RBP10.6□□□□□ -0.71
USP15-218ENST00000552346 LYSMD3Q7Z3D4 306 aa10.6□□□□□ -0.71
USP15-218ENST00000552346 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
USP15-218ENST00000552346 PCDHB9Q9Y5E1 797 aa10.6□□□□□ -0.71
USP15-218ENST00000552346 GSK3AP49840 483 aa10.59□□□□□ -0.71
USP15-218ENST00000552346 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
USP15-218ENST00000552346 SLURP2P0DP57 97 aa10.58□□□□□ -0.72
USP15-218ENST00000552346 FBXO45P0C2W1 286 aa10.57□□□□□ -0.72
USP15-218ENST00000552346 PRICKLE2Q7Z3G6 844 aa10.57□□□□□ -0.72
USP15-218ENST00000552346 GJD4Q96KN9 370 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms