RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
USP15-218ENST00000552346 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
USP15-218ENST00000552346 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
USP15-218ENST00000552346 PHF23Q9BUL5 403 aaPredicted RBP26.77■■□□□ 1.88
USP15-218ENST00000552346 FOXD1Q16676 465 aa25.24■■□□□ 1.63
USP15-218ENST00000552346 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
USP15-218ENST00000552346 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
USP15-218ENST00000552346 PIAS4Q8N2W9 510 aaPredicted RBP23.63■■□□□ 1.37
USP15-218ENST00000552346 MSH5O43196 834 aa23.61■■□□□ 1.37
USP15-218ENST00000552346 ADRA2BP18089 450 aa23.6■■□□□ 1.37
USP15-218ENST00000552346 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
USP15-218ENST00000552346 MAPK8IP2Q13387 824 aaPredicted RBP21.66■■□□□ 1.06
USP15-218ENST00000552346 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
USP15-218ENST00000552346 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
USP15-218ENST00000552346 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
USP15-218ENST00000552346 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
USP15-218ENST00000552346 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
USP15-218ENST00000552346 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
USP15-218ENST00000552346 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
USP15-218ENST00000552346 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
USP15-218ENST00000552346 CACNB1Q02641 598 aaPredicted RBP20.23■□□□□ 0.83
USP15-218ENST00000552346 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
USP15-218ENST00000552346 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
USP15-218ENST00000552346 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
USP15-218ENST00000552346 C1QBPQ07021 282 aaKnown RBP19.86■□□□□ 0.77
USP15-218ENST00000552346 KCNA4P22459 653 aa19.84■□□□□ 0.77
USP15-218ENST00000552346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.79■□□□□ 0.76
USP15-218ENST00000552346 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
USP15-218ENST00000552346 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
USP15-218ENST00000552346 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
USP15-218ENST00000552346 CAPN15O75808 1086 aa19.05■□□□□ 0.64
USP15-218ENST00000552346 DSG3P32926 999 aa18.89■□□□□ 0.61
USP15-218ENST00000552346 APLP2Q06481 763 aa18.86■□□□□ 0.61
USP15-218ENST00000552346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
USP15-218ENST00000552346 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
USP15-218ENST00000552346 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
USP15-218ENST00000552346 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
USP15-218ENST00000552346 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
USP15-218ENST00000552346 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
USP15-218ENST00000552346 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
USP15-218ENST00000552346 ABCB7O75027 752 aa18.61■□□□□ 0.57
USP15-218ENST00000552346 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
USP15-218ENST00000552346 POLA2Q14181 598 aa18.26■□□□□ 0.51
USP15-218ENST00000552346 ZBTB22O15209 634 aa18.23■□□□□ 0.51
USP15-218ENST00000552346 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
USP15-218ENST00000552346 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
USP15-218ENST00000552346 POTEHQ6S545 545 aa17.97■□□□□ 0.47
USP15-218ENST00000552346 ATXN8OSP0DMR3 200 aa17.91■□□□□ 0.46
USP15-218ENST00000552346 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
USP15-218ENST00000552346 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
USP15-218ENST00000552346 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
USP15-218ENST00000552346 CHRDL2Q6WN34 429 aa17.61■□□□□ 0.41
USP15-218ENST00000552346 FBLN2P98095 1184 aa17.51■□□□□ 0.39
USP15-218ENST00000552346 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
USP15-218ENST00000552346 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
USP15-218ENST00000552346 SPDYE2BA6NHP3 402 aa17.35■□□□□ 0.37
USP15-218ENST00000552346 SPDYE6P0CI01 402 aa17.35■□□□□ 0.37
USP15-218ENST00000552346 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
USP15-218ENST00000552346 SPDYE2Q495Y8 402 aa17.35■□□□□ 0.37
USP15-218ENST00000552346 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
USP15-218ENST00000552346 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
USP15-218ENST00000552346 PIP4P2Q8N4L2 257 aa17.21■□□□□ 0.35
USP15-218ENST00000552346 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
USP15-218ENST00000552346 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
USP15-218ENST00000552346 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
USP15-218ENST00000552346 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
USP15-218ENST00000552346 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
USP15-218ENST00000552346 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP15-218ENST00000552346 HAX1O00165 279 aa16.89■□□□□ 0.29
USP15-218ENST00000552346 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
USP15-218ENST00000552346 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
USP15-218ENST00000552346 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
USP15-218ENST00000552346 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
USP15-218ENST00000552346 EVX2Q03828 476 aa16.66■□□□□ 0.26
USP15-218ENST00000552346 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
USP15-218ENST00000552346 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
USP15-218ENST00000552346 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
USP15-218ENST00000552346 FARP1Q9Y4F1 1045 aaPredicted RBP16.43■□□□□ 0.22
USP15-218ENST00000552346 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
USP15-218ENST00000552346 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
USP15-218ENST00000552346 GABBR2O75899 941 aa16.3■□□□□ 0.2
USP15-218ENST00000552346 PROM2Q8N271 834 aa16.18■□□□□ 0.18
USP15-218ENST00000552346 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
USP15-218ENST00000552346 CLCN6P51797 869 aa16.07■□□□□ 0.16
USP15-218ENST00000552346 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
USP15-218ENST00000552346 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
USP15-218ENST00000552346 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
USP15-218ENST00000552346 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
USP15-218ENST00000552346 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
USP15-218ENST00000552346 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
USP15-218ENST00000552346 PHF12Q96QT6 1004 aa15.88■□□□□ 0.13
USP15-218ENST00000552346 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
USP15-218ENST00000552346 FKBP8Q14318 412 aa15.86■□□□□ 0.13
USP15-218ENST00000552346 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
USP15-218ENST00000552346 LHX8Q68G74 356 aa15.84■□□□□ 0.13
USP15-218ENST00000552346 MIER1Q8N108 512 aa15.84■□□□□ 0.13
USP15-218ENST00000552346 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.12
USP15-218ENST00000552346 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
USP15-218ENST00000552346 MS4A3Q96HJ5 214 aa15.67■□□□□ 0.1
USP15-218ENST00000552346 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms