RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
PACRG-207ENST00000542936 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
PACRG-207ENST00000542936 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
PACRG-207ENST00000542936 HELBQ8NG08 1087 aaPredicted RBP9.73□□□□□ -0.85
PACRG-207ENST00000542936 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
PACRG-207ENST00000542936 LRRC9Q6ZRR7 1453 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
PACRG-207ENST00000542936 HPS1Q92902 700 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 ATP13A2Q9NQ11 1180 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 TLL2Q9Y6L7 1015 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 PHLDB1Q86UU1 1377 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
PACRG-207ENST00000542936 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
PACRG-207ENST00000542936 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.86
PACRG-207ENST00000542936 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
PACRG-207ENST00000542936 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.86
PACRG-207ENST00000542936 FAM50AQ14320 339 aaKnown RBP9.7□□□□□ -0.86
PACRG-207ENST00000542936 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
PACRG-207ENST00000542936 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
PACRG-207ENST00000542936 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
PACRG-207ENST00000542936 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
PACRG-207ENST00000542936 SIAH2O43255 324 aa9.69□□□□□ -0.86
PACRG-207ENST00000542936 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
PACRG-207ENST00000542936 AGERQ15109 404 aa9.69□□□□□ -0.86
PACRG-207ENST00000542936 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
PACRG-207ENST00000542936 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
PACRG-207ENST00000542936 WASF2Q9Y6W5 498 aa9.69□□□□□ -0.86
PACRG-207ENST00000542936 NESP48681 1621 aa9.68□□□□□ -0.86
PACRG-207ENST00000542936 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
PACRG-207ENST00000542936 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
PACRG-207ENST00000542936 WFS1O76024 890 aa9.67□□□□□ -0.86
PACRG-207ENST00000542936 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
PACRG-207ENST00000542936 TRIM47Q96LD4 638 aa9.66□□□□□ -0.86
PACRG-207ENST00000542936 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
PACRG-207ENST00000542936 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
PACRG-207ENST00000542936 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.86
PACRG-207ENST00000542936 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
PACRG-207ENST00000542936 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
PACRG-207ENST00000542936 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
PACRG-207ENST00000542936 PCF11O94913 1555 aaKnown RBP9.65□□□□□ -0.86
PACRG-207ENST00000542936 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.86
PACRG-207ENST00000542936 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
PACRG-207ENST00000542936 FYCO1Q9BQS8 1478 aa9.65□□□□□ -0.87
PACRG-207ENST00000542936 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
PACRG-207ENST00000542936 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
PACRG-207ENST00000542936 AP1G2O75843 785 aa9.63□□□□□ -0.87
PACRG-207ENST00000542936 NFX1Q12986 1120 aaKnown RBP9.63□□□□□ -0.87
PACRG-207ENST00000542936 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
PACRG-207ENST00000542936 CFAP43Q8NDM7 1665 aa9.62□□□□□ -0.87
PACRG-207ENST00000542936 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
PACRG-207ENST00000542936 FAM174AQ8TBP5 190 aa9.62□□□□□ -0.87
PACRG-207ENST00000542936 SIN3AQ96ST3 1273 aa9.62□□□□□ -0.87
PACRG-207ENST00000542936 TDRD9Q8NDG6 1382 aaKnown RBP9.62□□□□□ -0.87
PACRG-207ENST00000542936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
PACRG-207ENST00000542936 MAGEB6P1A0A0J9YX57 407 aa9.61□□□□□ -0.87
PACRG-207ENST00000542936 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
PACRG-207ENST00000542936 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
PACRG-207ENST00000542936 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
PACRG-207ENST00000542936 FMN1Q68DA7 1419 aa9.61□□□□□ -0.87
PACRG-207ENST00000542936 CUL7Q14999 1698 aa9.61□□□□□ -0.87
PACRG-207ENST00000542936 NNTQ13423 1086 aa9.6□□□□□ -0.87
PACRG-207ENST00000542936 BPHLQ86WA6 291 aaPredicted RBP9.6□□□□□ -0.87
PACRG-207ENST00000542936 CAPN5O15484 640 aaPredicted RBP9.59□□□□□ -0.87
PACRG-207ENST00000542936 BMP1P13497 986 aa9.59□□□□□ -0.87
PACRG-207ENST00000542936 NR6A1Q15406 480 aa9.59□□□□□ -0.87
PACRG-207ENST00000542936 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
PACRG-207ENST00000542936 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
PACRG-207ENST00000542936 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
PACRG-207ENST00000542936 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 PDS5BQ9NTI5 1447 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 TERTO14746 1132 aaKnown RBP9.58□□□□□ -0.88
PACRG-207ENST00000542936 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 MTUS2Q5JR59 1369 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
PACRG-207ENST00000542936 RFC5P40937 340 aa9.57□□□□□ -0.88
PACRG-207ENST00000542936 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
PACRG-207ENST00000542936 ADH1CP00326 375 aa9.56□□□□□ -0.88
PACRG-207ENST00000542936 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
PACRG-207ENST00000542936 WIPF1O43516 503 aa9.55□□□□□ -0.88
PACRG-207ENST00000542936 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
PACRG-207ENST00000542936 WDR4P57081 412 aaKnown RBP9.55□□□□□ -0.88
PACRG-207ENST00000542936 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
PACRG-207ENST00000542936 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
PACRG-207ENST00000542936 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
PACRG-207ENST00000542936 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 WDR97A6NE52 1622 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
PACRG-207ENST00000542936 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 MPNDQ8N594 471 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 FKBPLQ9UIM3 349 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 PTPRKQ15262 1439 aa9.54□□□□□ -0.88
PACRG-207ENST00000542936 DDX10Q13206 875 aaKnown RBP9.53□□□□□ -0.88
PACRG-207ENST00000542936 TRIM46Q7Z4K8 759 aa9.53□□□□□ -0.88
PACRG-207ENST00000542936 CDK15Q96Q40 435 aa9.53□□□□□ -0.88
PACRG-207ENST00000542936 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
PACRG-207ENST00000542936 SAMD9Q5K651 1589 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms