RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
PACRG-207ENST00000542936 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
PACRG-207ENST00000542936 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
PACRG-207ENST00000542936 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
PACRG-207ENST00000542936 FOXD1Q16676 465 aa21.41■■□□□ 1.02
PACRG-207ENST00000542936 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
PACRG-207ENST00000542936 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
PACRG-207ENST00000542936 MSH5O43196 834 aa20.06■□□□□ 0.8
PACRG-207ENST00000542936 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
PACRG-207ENST00000542936 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
PACRG-207ENST00000542936 ADRA2BP18089 450 aa20■□□□□ 0.79
PACRG-207ENST00000542936 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
PACRG-207ENST00000542936 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
PACRG-207ENST00000542936 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
PACRG-207ENST00000542936 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
PACRG-207ENST00000542936 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
PACRG-207ENST00000542936 HOXD11P31277 338 aaPredicted RBP17.58■□□□□ 0.4
PACRG-207ENST00000542936 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
PACRG-207ENST00000542936 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
PACRG-207ENST00000542936 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
PACRG-207ENST00000542936 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
PACRG-207ENST00000542936 KCNA4P22459 653 aa17.11■□□□□ 0.33
PACRG-207ENST00000542936 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
PACRG-207ENST00000542936 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
PACRG-207ENST00000542936 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
PACRG-207ENST00000542936 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
PACRG-207ENST00000542936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
PACRG-207ENST00000542936 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
PACRG-207ENST00000542936 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
PACRG-207ENST00000542936 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
PACRG-207ENST00000542936 CAPN15O75808 1086 aa16.16■□□□□ 0.18
PACRG-207ENST00000542936 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
PACRG-207ENST00000542936 DSG3P32926 999 aa16.03■□□□□ 0.16
PACRG-207ENST00000542936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
PACRG-207ENST00000542936 APLP2Q06481 763 aa16.01■□□□□ 0.15
PACRG-207ENST00000542936 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
PACRG-207ENST00000542936 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
PACRG-207ENST00000542936 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
PACRG-207ENST00000542936 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
PACRG-207ENST00000542936 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
PACRG-207ENST00000542936 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
PACRG-207ENST00000542936 ABCB7O75027 752 aa15.77■□□□□ 0.12
PACRG-207ENST00000542936 ZBTB22O15209 634 aa15.72■□□□□ 0.11
PACRG-207ENST00000542936 POTEHQ6S545 545 aa15.62■□□□□ 0.09
PACRG-207ENST00000542936 POLA2Q14181 598 aa15.49■□□□□ 0.07
PACRG-207ENST00000542936 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
PACRG-207ENST00000542936 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
PACRG-207ENST00000542936 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
PACRG-207ENST00000542936 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
PACRG-207ENST00000542936 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
PACRG-207ENST00000542936 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
PACRG-207ENST00000542936 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
PACRG-207ENST00000542936 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
PACRG-207ENST00000542936 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
PACRG-207ENST00000542936 FBLN2P98095 1184 aa14.85□□□□□ -0.03
PACRG-207ENST00000542936 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
PACRG-207ENST00000542936 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
PACRG-207ENST00000542936 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
PACRG-207ENST00000542936 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
PACRG-207ENST00000542936 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
PACRG-207ENST00000542936 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
PACRG-207ENST00000542936 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
PACRG-207ENST00000542936 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
PACRG-207ENST00000542936 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
PACRG-207ENST00000542936 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
PACRG-207ENST00000542936 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
PACRG-207ENST00000542936 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
PACRG-207ENST00000542936 HAX1O00165 279 aa14.35□□□□□ -0.11
PACRG-207ENST00000542936 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
PACRG-207ENST00000542936 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
PACRG-207ENST00000542936 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
PACRG-207ENST00000542936 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
PACRG-207ENST00000542936 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
PACRG-207ENST00000542936 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
PACRG-207ENST00000542936 EVX2Q03828 476 aa14.12□□□□□ -0.15
PACRG-207ENST00000542936 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
PACRG-207ENST00000542936 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
PACRG-207ENST00000542936 FKBP8Q14318 412 aa13.93□□□□□ -0.18
PACRG-207ENST00000542936 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
PACRG-207ENST00000542936 GABBR2O75899 941 aa13.84□□□□□ -0.19
PACRG-207ENST00000542936 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
PACRG-207ENST00000542936 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
PACRG-207ENST00000542936 PROM2Q8N271 834 aa13.82□□□□□ -0.2
PACRG-207ENST00000542936 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
PACRG-207ENST00000542936 CLCN6P51797 869 aa13.67□□□□□ -0.22
PACRG-207ENST00000542936 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
PACRG-207ENST00000542936 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
PACRG-207ENST00000542936 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
PACRG-207ENST00000542936 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
PACRG-207ENST00000542936 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
PACRG-207ENST00000542936 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
PACRG-207ENST00000542936 MIER1Q8N108 512 aa13.55□□□□□ -0.24
PACRG-207ENST00000542936 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
PACRG-207ENST00000542936 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
PACRG-207ENST00000542936 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
PACRG-207ENST00000542936 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
PACRG-207ENST00000542936 LHX8Q68G74 356 aa13.47□□□□□ -0.25
PACRG-207ENST00000542936 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
PACRG-207ENST00000542936 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
PACRG-207ENST00000542936 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms