RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 AMPHP49418 695 aa16.86■□□□□ 0.29
CCS-202ENST00000525435 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
CCS-202ENST00000525435 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
CCS-202ENST00000525435 FBLN1P23142 703 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
CCS-202ENST00000525435 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
CCS-202ENST00000525435 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 RTL1A6NKG5 1358 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
CCS-202ENST00000525435 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
CCS-202ENST00000525435 HOXC9P31274 260 aa16.83■□□□□ 0.28
CCS-202ENST00000525435 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
CCS-202ENST00000525435 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
CCS-202ENST00000525435 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
CCS-202ENST00000525435 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
CCS-202ENST00000525435 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
CCS-202ENST00000525435 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
CCS-202ENST00000525435 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
CCS-202ENST00000525435 FLT4P35916 1363 aa16.81■□□□□ 0.28
CCS-202ENST00000525435 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
CCS-202ENST00000525435 CARD10Q9BWT7 1032 aa16.81■□□□□ 0.28
CCS-202ENST00000525435 KIF20BQ96Q89 1820 aa16.81■□□□□ 0.28
CCS-202ENST00000525435 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
CCS-202ENST00000525435 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
CCS-202ENST00000525435 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
CCS-202ENST00000525435 INSRP06213 1382 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 ERBB3P21860 1342 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 CSB-PGBD3P0DP91 1061 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
CCS-202ENST00000525435 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 TOM1L2Q6ZVM7 507 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 ANKRD24Q8TF21 1146 aa16.8■□□□□ 0.28
CCS-202ENST00000525435 COL18A1P39060 1754 aa16.79■□□□□ 0.28
CCS-202ENST00000525435 EMILIN1Q9Y6C2 1016 aa16.79■□□□□ 0.28
CCS-202ENST00000525435 CRB1P82279 1406 aa16.79■□□□□ 0.28
CCS-202ENST00000525435 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
CCS-202ENST00000525435 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
CCS-202ENST00000525435 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
CCS-202ENST00000525435 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
CCS-202ENST00000525435 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
CCS-202ENST00000525435 MTHFSP49914 203 aa16.75■□□□□ 0.27
CCS-202ENST00000525435 RALBP1Q15311 655 aa16.75■□□□□ 0.27
CCS-202ENST00000525435 NRAPQ86VF7 1730 aa16.75■□□□□ 0.27
CCS-202ENST00000525435 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
CCS-202ENST00000525435 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
CCS-202ENST00000525435 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
CCS-202ENST00000525435 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
CCS-202ENST00000525435 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
CCS-202ENST00000525435 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
CCS-202ENST00000525435 LTN1O94822 1766 aa16.72■□□□□ 0.27
CCS-202ENST00000525435 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
CCS-202ENST00000525435 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
CCS-202ENST00000525435 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
CCS-202ENST00000525435 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
CCS-202ENST00000525435 GLI3P10071 1580 aa16.71■□□□□ 0.27
CCS-202ENST00000525435 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
CCS-202ENST00000525435 IL2RBP14784 551 aa16.69■□□□□ 0.26
CCS-202ENST00000525435 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
CCS-202ENST00000525435 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
CCS-202ENST00000525435 IL13P35225 146 aa16.68■□□□□ 0.26
CCS-202ENST00000525435 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
CCS-202ENST00000525435 RGS12O14924 1447 aa16.68■□□□□ 0.26
CCS-202ENST00000525435 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
CCS-202ENST00000525435 A0A0G2JS52 829 aa16.67■□□□□ 0.26
CCS-202ENST00000525435 EXOC5O00471 708 aa16.67■□□□□ 0.26
CCS-202ENST00000525435 MYT1Q01538 1121 aa16.67■□□□□ 0.26
CCS-202ENST00000525435 EYA1Q99502 592 aa16.67■□□□□ 0.26
CCS-202ENST00000525435 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
CCS-202ENST00000525435 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
CCS-202ENST00000525435 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
CCS-202ENST00000525435 DDB1Q16531 1140 aa16.66■□□□□ 0.26
CCS-202ENST00000525435 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
CCS-202ENST00000525435 RGPD5Q99666 1765 aa16.65■□□□□ 0.26
CCS-202ENST00000525435 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
CCS-202ENST00000525435 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
CCS-202ENST00000525435 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
CCS-202ENST00000525435 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.25
CCS-202ENST00000525435 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
CCS-202ENST00000525435 TATP17735 454 aaPredicted RBP16.63■□□□□ 0.25
CCS-202ENST00000525435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCS-202ENST00000525435 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
CCS-202ENST00000525435 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
CCS-202ENST00000525435 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
CCS-202ENST00000525435 FAM196AQ6ZSG2 479 aa16.62■□□□□ 0.25
CCS-202ENST00000525435 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
CCS-202ENST00000525435 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
CCS-202ENST00000525435 THSD7AQ9UPZ6 1657 aa16.61■□□□□ 0.25
CCS-202ENST00000525435 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
CCS-202ENST00000525435 ANP32CO43423 234 aa16.59■□□□□ 0.25
CCS-202ENST00000525435 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
CCS-202ENST00000525435 KDRP35968 1356 aa16.59■□□□□ 0.25
CCS-202ENST00000525435 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
CCS-202ENST00000525435 UPF1Q92900 1129 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCS-202ENST00000525435 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
CCS-202ENST00000525435 BCL9O00512 1426 aa16.58■□□□□ 0.24
CCS-202ENST00000525435 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
CCS-202ENST00000525435 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms