RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SKIV2LQ15477 1246 aaKnown RBP10.64□□□□□ -0.71
CLK4-207ENST00000520909 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
CLK4-207ENST00000520909 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
CLK4-207ENST00000520909 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
CLK4-207ENST00000520909 DNMT3LQ9UJW3 386 aa10.62□□□□□ -0.71
CLK4-207ENST00000520909 KCNMA1Q12791 1236 aa10.61□□□□□ -0.71
CLK4-207ENST00000520909 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
CLK4-207ENST00000520909 ZBTB33Q86T24 672 aa10.61□□□□□ -0.71
CLK4-207ENST00000520909 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
CLK4-207ENST00000520909 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
CLK4-207ENST00000520909 GSK3AP49840 483 aa10.6□□□□□ -0.71
CLK4-207ENST00000520909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.71
CLK4-207ENST00000520909 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
CLK4-207ENST00000520909 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
CLK4-207ENST00000520909 TTLL8A6PVC2 850 aa10.59□□□□□ -0.71
CLK4-207ENST00000520909 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
CLK4-207ENST00000520909 DHX9Q08211 1270 aaKnown RBP10.58□□□□□ -0.71
CLK4-207ENST00000520909 NR6A1Q15406 480 aa10.58□□□□□ -0.71
CLK4-207ENST00000520909 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
CLK4-207ENST00000520909 PTK2Q05397 1052 aa10.58□□□□□ -0.72
CLK4-207ENST00000520909 CBLBQ13191 982 aa10.58□□□□□ -0.72
CLK4-207ENST00000520909 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
CLK4-207ENST00000520909 Q6ZVU0 165 aa10.58□□□□□ -0.72
CLK4-207ENST00000520909 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
CLK4-207ENST00000520909 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
CLK4-207ENST00000520909 FIGNL2A6NMB9 653 aa10.57□□□□□ -0.72
CLK4-207ENST00000520909 PPP2R2DQ66LE6 453 aa10.57□□□□□ -0.72
CLK4-207ENST00000520909 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLK4-207ENST00000520909 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
CLK4-207ENST00000520909 SPINT1O43278 529 aa10.55□□□□□ -0.72
CLK4-207ENST00000520909 AP1G2O75843 785 aa10.55□□□□□ -0.72
CLK4-207ENST00000520909 PTSQ03393 145 aa10.55□□□□□ -0.72
CLK4-207ENST00000520909 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
CLK4-207ENST00000520909 GPBP1L1Q9HC44 474 aaPredicted RBP10.55□□□□□ -0.72
CLK4-207ENST00000520909 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
CLK4-207ENST00000520909 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
CLK4-207ENST00000520909 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
CLK4-207ENST00000520909 ADAM32Q8TC27 787 aa10.52□□□□□ -0.73
CLK4-207ENST00000520909 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
CLK4-207ENST00000520909 NBPF20Q3BBV1 942 aa10.5□□□□□ -0.73
CLK4-207ENST00000520909 TMEM151AQ8N4L1 468 aa10.5□□□□□ -0.73
CLK4-207ENST00000520909 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
CLK4-207ENST00000520909 GPR161Q8N6U8 529 aaKnown RBP10.5□□□□□ -0.73
CLK4-207ENST00000520909 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
CLK4-207ENST00000520909 OCSTAMPQ9BR26 566 aa10.5□□□□□ -0.73
CLK4-207ENST00000520909 RELBQ01201 579 aa10.49□□□□□ -0.73
CLK4-207ENST00000520909 CNTNAP3BQ96NU0 1288 aa10.49□□□□□ -0.73
CLK4-207ENST00000520909 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
CLK4-207ENST00000520909 NANOS1Q8WY41 292 aaKnown RBP10.48□□□□□ -0.73
CLK4-207ENST00000520909 GDF11O95390 407 aa10.47□□□□□ -0.73
CLK4-207ENST00000520909 CTSOP43234 321 aaPredicted RBP10.47□□□□□ -0.73
CLK4-207ENST00000520909 RASSF7Q02833 373 aa10.47□□□□□ -0.73
CLK4-207ENST00000520909 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
CLK4-207ENST00000520909 EPS8L1Q8TE68 723 aa10.47□□□□□ -0.73
CLK4-207ENST00000520909 INSM2Q96T92 566 aaPredicted RBP10.47□□□□□ -0.73
CLK4-207ENST00000520909 SLC35F4A4IF30 521 aa10.46□□□□□ -0.73
CLK4-207ENST00000520909 COL25A1Q9BXS0 654 aaPredicted RBP10.46□□□□□ -0.73
CLK4-207ENST00000520909 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.73
CLK4-207ENST00000520909 TMPRSS4Q9NRS4 437 aa10.46□□□□□ -0.73
CLK4-207ENST00000520909 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
CLK4-207ENST00000520909 RAB15P59190 212 aa10.45□□□□□ -0.74
CLK4-207ENST00000520909 KRT76Q01546 638 aa10.45□□□□□ -0.74
CLK4-207ENST00000520909 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
CLK4-207ENST00000520909 HMX1Q9NP08 348 aaPredicted RBP10.44□□□□□ -0.74
CLK4-207ENST00000520909 ITGA6P23229 1130 aa10.43□□□□□ -0.74
CLK4-207ENST00000520909 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
CLK4-207ENST00000520909 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
CLK4-207ENST00000520909 ERVH48-1M5A8F1 160 aa10.42□□□□□ -0.74
CLK4-207ENST00000520909 RFC5P40937 340 aa10.42□□□□□ -0.74
CLK4-207ENST00000520909 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
CLK4-207ENST00000520909 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
CLK4-207ENST00000520909 CDC14CA4D256 554 aa10.41□□□□□ -0.74
CLK4-207ENST00000520909 ADH1AP07327 375 aa10.41□□□□□ -0.74
CLK4-207ENST00000520909 RNF217Q8TC41 542 aa10.41□□□□□ -0.74
CLK4-207ENST00000520909 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
CLK4-207ENST00000520909 RNF225M0QZC1 329 aaPredicted RBP10.4□□□□□ -0.74
CLK4-207ENST00000520909 ADD1P35611 737 aaKnown RBP10.4□□□□□ -0.74
CLK4-207ENST00000520909 LILRA1O75019 489 aa10.39□□□□□ -0.75
CLK4-207ENST00000520909 PTGIRP43119 386 aa10.39□□□□□ -0.75
CLK4-207ENST00000520909 BCANQ96GW7 911 aa10.39□□□□□ -0.75
CLK4-207ENST00000520909 ESPNB1AK53 854 aa10.38□□□□□ -0.75
CLK4-207ENST00000520909 TMEM259Q4ZIN3 620 aa10.38□□□□□ -0.75
CLK4-207ENST00000520909 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
CLK4-207ENST00000520909 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
CLK4-207ENST00000520909 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
CLK4-207ENST00000520909 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
CLK4-207ENST00000520909 LYSMD3Q7Z3D4 306 aa10.35□□□□□ -0.75
CLK4-207ENST00000520909 SVOPQ8N4V2 548 aa10.35□□□□□ -0.75
CLK4-207ENST00000520909 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
CLK4-207ENST00000520909 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
CLK4-207ENST00000520909 SLURP2P0DP57 97 aa10.34□□□□□ -0.75
CLK4-207ENST00000520909 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
CLK4-207ENST00000520909 ZNF385CQ66K41 422 aaPredicted RBP10.34□□□□□ -0.75
CLK4-207ENST00000520909 TRIM34Q9BYJ4 488 aa10.34□□□□□ -0.75
CLK4-207ENST00000520909 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
CLK4-207ENST00000520909 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
CLK4-207ENST00000520909 RNF144AP50876 292 aaPredicted RBP10.32□□□□□ -0.76
CLK4-207ENST00000520909 PRICKLE2Q7Z3G6 844 aa10.32□□□□□ -0.76
CLK4-207ENST00000520909 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
CLK4-207ENST00000520909 PCDHB9Q9Y5E1 797 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms