RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 CCDC116Q8IYX3 515 aa9.55□□□□□ -0.88
HDAC2-204ENST00000518756 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
HDAC2-204ENST00000518756 ERFEQ4G0M1 354 aa9.54□□□□□ -0.88
HDAC2-204ENST00000518756 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
HDAC2-204ENST00000518756 EMILIN1Q9Y6C2 1016 aa9.54□□□□□ -0.88
HDAC2-204ENST00000518756 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
HDAC2-204ENST00000518756 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
HDAC2-204ENST00000518756 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
HDAC2-204ENST00000518756 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC2-204ENST00000518756 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
HDAC2-204ENST00000518756 PROCA1Q8NCQ7 364 aaPredicted RBP9.51□□□□□ -0.89
HDAC2-204ENST00000518756 TSEN34Q9BSV6 310 aaKnown RBP9.51□□□□□ -0.89
HDAC2-204ENST00000518756 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
HDAC2-204ENST00000518756 FKBPLQ9UIM3 349 aa9.5□□□□□ -0.89
HDAC2-204ENST00000518756 DNMT3LQ9UJW3 386 aa9.5□□□□□ -0.89
HDAC2-204ENST00000518756 VSIG8P0DPA2 414 aa9.49□□□□□ -0.89
HDAC2-204ENST00000518756 LORP23490 312 aaPredicted RBP9.49□□□□□ -0.89
HDAC2-204ENST00000518756 NR6A1Q15406 480 aa9.49□□□□□ -0.89
HDAC2-204ENST00000518756 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
HDAC2-204ENST00000518756 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
HDAC2-204ENST00000518756 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
HDAC2-204ENST00000518756 PCMTD1Q96MG8 357 aaPredicted RBP9.49□□□□□ -0.89
HDAC2-204ENST00000518756 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
HDAC2-204ENST00000518756 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
HDAC2-204ENST00000518756 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
HDAC2-204ENST00000518756 AP1G2O75843 785 aa9.47□□□□□ -0.89
HDAC2-204ENST00000518756 CBLBQ13191 982 aa9.47□□□□□ -0.89
HDAC2-204ENST00000518756 KCTD15Q96SI1 283 aaPredicted RBP9.47□□□□□ -0.89
HDAC2-204ENST00000518756 TTLL8A6PVC2 850 aa9.46□□□□□ -0.9
HDAC2-204ENST00000518756 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
HDAC2-204ENST00000518756 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
HDAC2-204ENST00000518756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
HDAC2-204ENST00000518756 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
HDAC2-204ENST00000518756 PTK2Q05397 1052 aa9.44□□□□□ -0.9
HDAC2-204ENST00000518756 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
HDAC2-204ENST00000518756 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
HDAC2-204ENST00000518756 RAB15P59190 212 aa9.42□□□□□ -0.9
HDAC2-204ENST00000518756 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
HDAC2-204ENST00000518756 ADAM32Q8TC27 787 aa9.42□□□□□ -0.9
HDAC2-204ENST00000518756 PTSQ03393 145 aa9.41□□□□□ -0.9
HDAC2-204ENST00000518756 Q6ZVU0 165 aa9.41□□□□□ -0.9
HDAC2-204ENST00000518756 PNMA1Q8ND90 353 aa9.41□□□□□ -0.9
HDAC2-204ENST00000518756 AGBL1Q96MI9 1066 aa9.41□□□□□ -0.9
HDAC2-204ENST00000518756 SPINT1O43278 529 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 RFC5P40937 340 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 RELBQ01201 579 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 EPS8L1Q8TE68 723 aa9.4□□□□□ -0.9
HDAC2-204ENST00000518756 OCSTAMPQ9BR26 566 aa9.39□□□□□ -0.91
HDAC2-204ENST00000518756 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
HDAC2-204ENST00000518756 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
HDAC2-204ENST00000518756 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
HDAC2-204ENST00000518756 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
HDAC2-204ENST00000518756 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
HDAC2-204ENST00000518756 TMPRSS4Q9NRS4 437 aa9.37□□□□□ -0.91
HDAC2-204ENST00000518756 CTSOP43234 321 aaPredicted RBP9.36□□□□□ -0.91
HDAC2-204ENST00000518756 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
HDAC2-204ENST00000518756 CCDC155Q8N6L0 562 aa9.36□□□□□ -0.91
HDAC2-204ENST00000518756 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
HDAC2-204ENST00000518756 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
HDAC2-204ENST00000518756 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
HDAC2-204ENST00000518756 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
HDAC2-204ENST00000518756 CDC14CA4D256 554 aa9.34□□□□□ -0.91
HDAC2-204ENST00000518756 KRT76Q01546 638 aa9.34□□□□□ -0.91
HDAC2-204ENST00000518756 GPR161Q8N6U8 529 aaKnown RBP9.34□□□□□ -0.91
HDAC2-204ENST00000518756 COL25A1Q9BXS0 654 aaPredicted RBP9.33□□□□□ -0.92
HDAC2-204ENST00000518756 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
HDAC2-204ENST00000518756 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
HDAC2-204ENST00000518756 ADH1AP07327 375 aa9.31□□□□□ -0.92
HDAC2-204ENST00000518756 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
HDAC2-204ENST00000518756 ITGA6P23229 1130 aa9.3□□□□□ -0.92
HDAC2-204ENST00000518756 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
HDAC2-204ENST00000518756 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
HDAC2-204ENST00000518756 VWA5B2Q8N398 1253 aa9.29□□□□□ -0.92
HDAC2-204ENST00000518756 NANOS1Q8WY41 292 aaKnown RBP9.29□□□□□ -0.92
HDAC2-204ENST00000518756 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
HDAC2-204ENST00000518756 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
HDAC2-204ENST00000518756 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
HDAC2-204ENST00000518756 LILRA1O75019 489 aa9.27□□□□□ -0.93
HDAC2-204ENST00000518756 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
HDAC2-204ENST00000518756 SVOPQ8N4V2 548 aa9.27□□□□□ -0.93
HDAC2-204ENST00000518756 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.93
HDAC2-204ENST00000518756 PCDHB9Q9Y5E1 797 aa9.27□□□□□ -0.93
HDAC2-204ENST00000518756 ESPNB1AK53 854 aa9.26□□□□□ -0.93
HDAC2-204ENST00000518756 SOCS7O14512 581 aa9.26□□□□□ -0.93
HDAC2-204ENST00000518756 PTGIRP43119 386 aa9.26□□□□□ -0.93
HDAC2-204ENST00000518756 SEPT12Q8IYM1 358 aa9.25□□□□□ -0.93
HDAC2-204ENST00000518756 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
HDAC2-204ENST00000518756 ZBBXA8MT70 800 aa9.24□□□□□ -0.93
HDAC2-204ENST00000518756 APBB1O00213 710 aa9.24□□□□□ -0.93
HDAC2-204ENST00000518756 LYSMD3Q7Z3D4 306 aa9.24□□□□□ -0.93
HDAC2-204ENST00000518756 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
HDAC2-204ENST00000518756 RNF225M0QZC1 329 aaPredicted RBP9.23□□□□□ -0.93
HDAC2-204ENST00000518756 KCNMA1Q12791 1236 aa9.23□□□□□ -0.93
HDAC2-204ENST00000518756 ZNF385CQ66K41 422 aaPredicted RBP9.23□□□□□ -0.93
HDAC2-204ENST00000518756 KDF1Q8NAX2 398 aaPredicted RBP9.23□□□□□ -0.93
HDAC2-204ENST00000518756 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
HDAC2-204ENST00000518756 GIGYF1O75420 1035 aaPredicted RBP9.22□□□□□ -0.93
HDAC2-204ENST00000518756 FBXO45P0C2W1 286 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms