RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
HDAC2-204ENST00000518756 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
HDAC2-204ENST00000518756 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
HDAC2-204ENST00000518756 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
HDAC2-204ENST00000518756 FOXD1Q16676 465 aa21.89■■□□□ 1.09
HDAC2-204ENST00000518756 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
HDAC2-204ENST00000518756 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
HDAC2-204ENST00000518756 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
HDAC2-204ENST00000518756 ADRA2BP18089 450 aa20.5■□□□□ 0.87
HDAC2-204ENST00000518756 MSH5O43196 834 aa20.49■□□□□ 0.87
HDAC2-204ENST00000518756 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
HDAC2-204ENST00000518756 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
HDAC2-204ENST00000518756 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
HDAC2-204ENST00000518756 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
HDAC2-204ENST00000518756 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
HDAC2-204ENST00000518756 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
HDAC2-204ENST00000518756 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
HDAC2-204ENST00000518756 HOXD11P31277 338 aaPredicted RBP17.96■□□□□ 0.47
HDAC2-204ENST00000518756 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
HDAC2-204ENST00000518756 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
HDAC2-204ENST00000518756 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
HDAC2-204ENST00000518756 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
HDAC2-204ENST00000518756 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
HDAC2-204ENST00000518756 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
HDAC2-204ENST00000518756 KCNA4P22459 653 aa17.24■□□□□ 0.35
HDAC2-204ENST00000518756 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
HDAC2-204ENST00000518756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■□□□ 13.1
HDAC2-204ENST00000518756 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
HDAC2-204ENST00000518756 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
HDAC2-204ENST00000518756 CAPN15O75808 1086 aa16.58■□□□□ 0.24
HDAC2-204ENST00000518756 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
HDAC2-204ENST00000518756 APLP2Q06481 763 aa16.39■□□□□ 0.21
HDAC2-204ENST00000518756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
HDAC2-204ENST00000518756 DSG3P32926 999 aa16.38■□□□□ 0.21
HDAC2-204ENST00000518756 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
HDAC2-204ENST00000518756 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
HDAC2-204ENST00000518756 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
HDAC2-204ENST00000518756 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
HDAC2-204ENST00000518756 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
HDAC2-204ENST00000518756 ABCB7O75027 752 aa16.21■□□□□ 0.19
HDAC2-204ENST00000518756 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
HDAC2-204ENST00000518756 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
HDAC2-204ENST00000518756 POLA2Q14181 598 aa15.87■□□□□ 0.13
HDAC2-204ENST00000518756 ZBTB22O15209 634 aa15.84■□□□□ 0.13
HDAC2-204ENST00000518756 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
HDAC2-204ENST00000518756 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
HDAC2-204ENST00000518756 POTEHQ6S545 545 aa15.6■□□□□ 0.09
HDAC2-204ENST00000518756 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
HDAC2-204ENST00000518756 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
HDAC2-204ENST00000518756 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
HDAC2-204ENST00000518756 CHRDL2Q6WN34 429 aa15.3■□□□□ 0.04
HDAC2-204ENST00000518756 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
HDAC2-204ENST00000518756 FBLN2P98095 1184 aa15.24■□□□□ 0.03
HDAC2-204ENST00000518756 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
HDAC2-204ENST00000518756 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
HDAC2-204ENST00000518756 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
HDAC2-204ENST00000518756 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
HDAC2-204ENST00000518756 SPDYE6P0CI01 402 aa15.07■□□□□ 0
HDAC2-204ENST00000518756 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
HDAC2-204ENST00000518756 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
HDAC2-204ENST00000518756 PITPNM1O00562 1244 aa15.03■□□□□ -0
HDAC2-204ENST00000518756 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
HDAC2-204ENST00000518756 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
HDAC2-204ENST00000518756 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
HDAC2-204ENST00000518756 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.044e-7■■■■■ 27
HDAC2-204ENST00000518756 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
HDAC2-204ENST00000518756 SPDYE1Q8NFV5 336 aaPredicted RBP14.81□□□□□ -0.04
HDAC2-204ENST00000518756 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDAC2-204ENST00000518756 HAX1O00165 279 aa14.69□□□□□ -0.06
HDAC2-204ENST00000518756 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
HDAC2-204ENST00000518756 PRKAR2AP13861 404 aaKnown RBP14.65□□□□□ -0.06
HDAC2-204ENST00000518756 PRR29P0C7W0 189 aa14.56□□□□□ -0.08
HDAC2-204ENST00000518756 CHADLQ6NUI6 762 aa14.51□□□□□ -0.09
HDAC2-204ENST00000518756 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
HDAC2-204ENST00000518756 EVX2Q03828 476 aa14.44□□□□□ -0.1
HDAC2-204ENST00000518756 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
HDAC2-204ENST00000518756 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
HDAC2-204ENST00000518756 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
HDAC2-204ENST00000518756 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
HDAC2-204ENST00000518756 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
HDAC2-204ENST00000518756 GABBR2O75899 941 aa14.14□□□□□ -0.15
HDAC2-204ENST00000518756 PROM2Q8N271 834 aa14.01□□□□□ -0.17
HDAC2-204ENST00000518756 ZRANB1Q9UGI0 708 aa14.01□□□□□ -0.17
HDAC2-204ENST00000518756 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC2-204ENST00000518756 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
HDAC2-204ENST00000518756 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
HDAC2-204ENST00000518756 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
HDAC2-204ENST00000518756 CLCN6P51797 869 aa13.9□□□□□ -0.18
HDAC2-204ENST00000518756 DCBLD2Q96PD2 775 aa13.84□□□□□ -0.19
HDAC2-204ENST00000518756 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
HDAC2-204ENST00000518756 FKBP8Q14318 412 aa13.82□□□□□ -0.2
HDAC2-204ENST00000518756 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
HDAC2-204ENST00000518756 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
HDAC2-204ENST00000518756 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
HDAC2-204ENST00000518756 MIER1Q8N108 512 aa13.79□□□□□ -0.2
HDAC2-204ENST00000518756 LHX8Q68G74 356 aa13.75□□□□□ -0.21
HDAC2-204ENST00000518756 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
HDAC2-204ENST00000518756 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
HDAC2-204ENST00000518756 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
HDAC2-204ENST00000518756 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms