RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 WRNQ14191 1432 aaPredicted RBP eCLIP7.87□□□□□ -1.15
PTPN13-208ENST00000511105 TTBK1Q5TCY1 1321 aaPredicted RBP7.87□□□□□ -1.15
PTPN13-208ENST00000511105 SIAH2O43255 324 aa7.87□□□□□ -1.15
PTPN13-208ENST00000511105 AVPP01185 164 aa7.87□□□□□ -1.15
PTPN13-208ENST00000511105 LYPD8Q6UX82 237 aa7.87□□□□□ -1.15
PTPN13-208ENST00000511105 NPM2Q86SE8 214 aaKnown RBP7.87□□□□□ -1.15
PTPN13-208ENST00000511105 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
PTPN13-208ENST00000511105 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
PTPN13-208ENST00000511105 WNT7BP56706 349 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
PTPN13-208ENST00000511105 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 SERPINA10Q9UK55 444 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 CHD1O14646 1710 aa7.86□□□□□ -1.15
PTPN13-208ENST00000511105 SYNJ1O43426 1573 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 PROCA1Q8NCQ7 364 aaPredicted RBP7.85□□□□□ -1.15
PTPN13-208ENST00000511105 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 TLL2Q9Y6L7 1015 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 GAPVD1Q14C86 1478 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 RIMBP3CA6NJZ7 1639 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 RIMBP3BA6NNM3 1639 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 RIMBP3Q9UFD9 1639 aa7.85□□□□□ -1.15
PTPN13-208ENST00000511105 GRIN2BQ13224 1484 aa7.84□□□□□ -1.15
PTPN13-208ENST00000511105 RAD21O60216 631 aa7.84□□□□□ -1.15
PTPN13-208ENST00000511105 LILRB3O75022 631 aa7.84□□□□□ -1.15
PTPN13-208ENST00000511105 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
PTPN13-208ENST00000511105 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
PTPN13-208ENST00000511105 CCDC97Q96F63 343 aaPredicted RBP7.84□□□□□ -1.15
PTPN13-208ENST00000511105 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
PTPN13-208ENST00000511105 SOCS7O14512 581 aa7.83□□□□□ -1.16
PTPN13-208ENST00000511105 GJA5P36382 358 aa7.83□□□□□ -1.16
PTPN13-208ENST00000511105 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
PTPN13-208ENST00000511105 ZNF511Q8NB15 262 aa7.83□□□□□ -1.16
PTPN13-208ENST00000511105 COG6Q9Y2V7 657 aa7.83□□□□□ -1.16
PTPN13-208ENST00000511105 ARHGEF11O15085 1522 aa7.83□□□□□ -1.16
PTPN13-208ENST00000511105 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
PTPN13-208ENST00000511105 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
PTPN13-208ENST00000511105 ARID5BQ14865 1188 aa7.82□□□□□ -1.16
PTPN13-208ENST00000511105 DESI1Q6ICB0 168 aa7.82□□□□□ -1.16
PTPN13-208ENST00000511105 WASF2Q9Y6W5 498 aa7.82□□□□□ -1.16
PTPN13-208ENST00000511105 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
PTPN13-208ENST00000511105 AGERQ15109 404 aa7.81□□□□□ -1.16
PTPN13-208ENST00000511105 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
PTPN13-208ENST00000511105 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
PTPN13-208ENST00000511105 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
PTPN13-208ENST00000511105 ZNF777Q9ULD5 760 aaPredicted RBP7.81□□□□□ -1.16
PTPN13-208ENST00000511105 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
PTPN13-208ENST00000511105 BMP1P13497 986 aa7.8□□□□□ -1.16
PTPN13-208ENST00000511105 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
PTPN13-208ENST00000511105 CTC1Q2NKJ3 1217 aa7.8□□□□□ -1.16
PTPN13-208ENST00000511105 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
PTPN13-208ENST00000511105 RFC5P40937 340 aa7.79□□□□□ -1.16
PTPN13-208ENST00000511105 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
PTPN13-208ENST00000511105 KCTD17Q8N5Z5 321 aa7.79□□□□□ -1.16
PTPN13-208ENST00000511105 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
PTPN13-208ENST00000511105 SYNJ2O15056 1496 aa7.79□□□□□ -1.16
PTPN13-208ENST00000511105 TOP2BQ02880 1626 aa7.78□□□□□ -1.16
PTPN13-208ENST00000511105 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
PTPN13-208ENST00000511105 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
PTPN13-208ENST00000511105 PBRM1Q86U86 1689 aa7.77□□□□□ -1.17
PTPN13-208ENST00000511105 MAGI1Q96QZ7 1491 aaPredicted RBP7.77□□□□□ -1.17
PTPN13-208ENST00000511105 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
PTPN13-208ENST00000511105 ERCC6L2Q5T890 1561 aa7.76□□□□□ -1.17
PTPN13-208ENST00000511105 IGF1RP08069 1367 aa7.76□□□□□ -1.17
PTPN13-208ENST00000511105 CAPN5O15484 640 aaPredicted RBP7.76□□□□□ -1.17
PTPN13-208ENST00000511105 VARSP26640 1264 aaKnown RBP7.76□□□□□ -1.17
PTPN13-208ENST00000511105 WDR97A6NE52 1622 aa7.76□□□□□ -1.17
PTPN13-208ENST00000511105 BIVM-ERCC5R4GMW8 1640 aa7.76□□□□□ -1.17
PTPN13-208ENST00000511105 RUSC2Q8N2Y8 1516 aa7.76□□□□□ -1.17
PTPN13-208ENST00000511105 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 NNTQ13423 1086 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 TRIM46Q7Z4K8 759 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 MTMR14Q8NCE2 650 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 SNRKQ9NRH2 765 aa7.75□□□□□ -1.17
PTPN13-208ENST00000511105 MAGEB6P1A0A0J9YX57 407 aa7.74□□□□□ -1.17
PTPN13-208ENST00000511105 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
PTPN13-208ENST00000511105 HELBQ8NG08 1087 aaPredicted RBP7.74□□□□□ -1.17
PTPN13-208ENST00000511105 CARD14Q9BXL6 1004 aa7.74□□□□□ -1.17
PTPN13-208ENST00000511105 GRIN2AQ12879 1464 aa7.74□□□□□ -1.17
PTPN13-208ENST00000511105 FHAD1B1AJZ9 1412 aa7.73□□□□□ -1.17
PTPN13-208ENST00000511105 AP1G2O75843 785 aa7.73□□□□□ -1.17
PTPN13-208ENST00000511105 NR6A1Q15406 480 aa7.73□□□□□ -1.17
PTPN13-208ENST00000511105 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
PTPN13-208ENST00000511105 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
PTPN13-208ENST00000511105 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 PPP1R15AO75807 674 aaPredicted RBP7.72□□□□□ -1.17
PTPN13-208ENST00000511105 NR3C2P08235 984 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
PTPN13-208ENST00000511105 FAM174AQ8TBP5 190 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 STK17AQ9UEE5 414 aa7.72□□□□□ -1.17
PTPN13-208ENST00000511105 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
PTPN13-208ENST00000511105 CEP170Q5SW79 1584 aa7.71□□□□□ -1.17
PTPN13-208ENST00000511105 PRG4Q92954 1404 aaPredicted RBP7.71□□□□□ -1.17
PTPN13-208ENST00000511105 SOBPA7XYQ1 873 aa7.71□□□□□ -1.18
PTPN13-208ENST00000511105 GRM5P41594 1212 aa7.71□□□□□ -1.18
PTPN13-208ENST00000511105 VEGFBP49765 207 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms