RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 MPNDQ8N594 471 aa13.48□□□□□ -0.25
PFDN1-202ENST00000507185 ZNF775Q96BV0 537 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-202ENST00000507185 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
PFDN1-202ENST00000507185 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
PFDN1-202ENST00000507185 PPP2R2DQ66LE6 453 aa13.47□□□□□ -0.25
PFDN1-202ENST00000507185 FBXO31Q5XUX0 539 aaPredicted RBP13.46□□□□□ -0.25
PFDN1-202ENST00000507185 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
PFDN1-202ENST00000507185 LRRN4Q8WUT4 740 aa13.44□□□□□ -0.26
PFDN1-202ENST00000507185 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
PFDN1-202ENST00000507185 AP1G2O75843 785 aa13.43□□□□□ -0.26
PFDN1-202ENST00000507185 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
PFDN1-202ENST00000507185 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
PFDN1-202ENST00000507185 NNTQ13423 1086 aa13.42□□□□□ -0.26
PFDN1-202ENST00000507185 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
PFDN1-202ENST00000507185 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
PFDN1-202ENST00000507185 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
PFDN1-202ENST00000507185 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
PFDN1-202ENST00000507185 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
PFDN1-202ENST00000507185 ADH1CP00326 375 aa13.4□□□□□ -0.26
PFDN1-202ENST00000507185 GPKOWQ92917 476 aaPredicted RBP eCLIP13.4□□□□□ -0.26
PFDN1-202ENST00000507185 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-202ENST00000507185 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
PFDN1-202ENST00000507185 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
PFDN1-202ENST00000507185 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
PFDN1-202ENST00000507185 MAGEB6P1A0A0J9YX57 407 aa13.38□□□□□ -0.27
PFDN1-202ENST00000507185 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-202ENST00000507185 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
PFDN1-202ENST00000507185 SH3RF1Q7Z6J0 888 aa13.38□□□□□ -0.27
PFDN1-202ENST00000507185 SYNJ2O15056 1496 aa13.37□□□□□ -0.27
PFDN1-202ENST00000507185 GAPVD1Q14C86 1478 aa13.37□□□□□ -0.27
PFDN1-202ENST00000507185 NR6A1Q15406 480 aa13.37□□□□□ -0.27
PFDN1-202ENST00000507185 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
PFDN1-202ENST00000507185 FKBPLQ9UIM3 349 aa13.37□□□□□ -0.27
PFDN1-202ENST00000507185 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
PFDN1-202ENST00000507185 CARD14Q9BXL6 1004 aa13.36□□□□□ -0.27
PFDN1-202ENST00000507185 BMP1P13497 986 aa13.35□□□□□ -0.27
PFDN1-202ENST00000507185 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
PFDN1-202ENST00000507185 RFC5P40937 340 aa13.35□□□□□ -0.27
PFDN1-202ENST00000507185 WDR4P57081 412 aaKnown RBP13.35□□□□□ -0.27
PFDN1-202ENST00000507185 NR5A1Q13285 461 aa13.35□□□□□ -0.27
PFDN1-202ENST00000507185 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
PFDN1-202ENST00000507185 PDXDC2PQ6P474 469 aa13.34□□□□□ -0.27
PFDN1-202ENST00000507185 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
PFDN1-202ENST00000507185 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
PFDN1-202ENST00000507185 GRM5P41594 1212 aa13.33□□□□□ -0.28
PFDN1-202ENST00000507185 CUX1P39880 1505 aa13.33□□□□□ -0.28
PFDN1-202ENST00000507185 TIMP2P16035 220 aa13.32□□□□□ -0.28
PFDN1-202ENST00000507185 VASH1Q7L8A9 365 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-202ENST00000507185 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
PFDN1-202ENST00000507185 TRMT44Q8IYL2 757 aaKnown RBP13.32□□□□□ -0.28
PFDN1-202ENST00000507185 ARHGAP9Q9BRR9 750 aa13.32□□□□□ -0.28
PFDN1-202ENST00000507185 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
PFDN1-202ENST00000507185 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
PFDN1-202ENST00000507185 MAP4K5Q9Y4K4 846 aa13.3□□□□□ -0.28
PFDN1-202ENST00000507185 NR3C2P08235 984 aa13.29□□□□□ -0.28
PFDN1-202ENST00000507185 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
PFDN1-202ENST00000507185 TMEM259Q4ZIN3 620 aa13.29□□□□□ -0.28
PFDN1-202ENST00000507185 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
PFDN1-202ENST00000507185 KLF16Q9BXK1 252 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-202ENST00000507185 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
PFDN1-202ENST00000507185 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-202ENST00000507185 FSHRP23945 695 aa13.28□□□□□ -0.28
PFDN1-202ENST00000507185 HMX1Q9NP08 348 aaPredicted RBP13.28□□□□□ -0.28
PFDN1-202ENST00000507185 PTK2Q05397 1052 aa13.27□□□□□ -0.29
PFDN1-202ENST00000507185 EPS8L1Q8TE68 723 aa13.27□□□□□ -0.29
PFDN1-202ENST00000507185 SCARF1Q14162 830 aa13.26□□□□□ -0.29
PFDN1-202ENST00000507185 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
PFDN1-202ENST00000507185 ITPKCQ96DU7 683 aa13.26□□□□□ -0.29
PFDN1-202ENST00000507185 ZFAND3Q9H8U3 227 aa13.26□□□□□ -0.29
PFDN1-202ENST00000507185 MRPL14Q6P1L8 145 aaKnown RBP13.25□□□□□ -0.29
PFDN1-202ENST00000507185 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
PFDN1-202ENST00000507185 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
PFDN1-202ENST00000507185 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
PFDN1-202ENST00000507185 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
PFDN1-202ENST00000507185 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
PFDN1-202ENST00000507185 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
PFDN1-202ENST00000507185 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
PFDN1-202ENST00000507185 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
PFDN1-202ENST00000507185 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.29
PFDN1-202ENST00000507185 WFS1O76024 890 aa13.21□□□□□ -0.29
PFDN1-202ENST00000507185 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.29
PFDN1-202ENST00000507185 GRIN2AQ12879 1464 aa13.21□□□□□ -0.3
PFDN1-202ENST00000507185 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
PFDN1-202ENST00000507185 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
PFDN1-202ENST00000507185 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
PFDN1-202ENST00000507185 KCTD15Q96SI1 283 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-202ENST00000507185 OCSTAMPQ9BR26 566 aa13.19□□□□□ -0.3
PFDN1-202ENST00000507185 UPP2O95045 317 aa13.18□□□□□ -0.3
PFDN1-202ENST00000507185 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
PFDN1-202ENST00000507185 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
PFDN1-202ENST00000507185 TERTO14746 1132 aaKnown RBP13.17□□□□□ -0.3
PFDN1-202ENST00000507185 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
PFDN1-202ENST00000507185 CEP170Q5SW79 1584 aa13.16□□□□□ -0.3
PFDN1-202ENST00000507185 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
PFDN1-202ENST00000507185 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
PFDN1-202ENST00000507185 LCE2AQ5TA79 106 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-202ENST00000507185 PGPEP1Q9NXJ5 209 aa13.16□□□□□ -0.3
PFDN1-202ENST00000507185 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
PFDN1-202ENST00000507185 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-202ENST00000507185 MEIOBQ8N635 442 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms